iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111550

Ensembl Protein ID

Solyc07g006400.1.1

UniProt Accession

K4CBB1; K4CBB1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g006400.1	Solyc07g006400.1.1	Solyc07g006400.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.3	93	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle fkdg   + lp CgH+fh +C+  w        +  +CP+Cr
   Q: 93   CAICLEGFKDGeiCRKLPdCGHLFHVKCVDSW------LIRVLNCPICR 135
           ********99887888889*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MPIPIQNQET KPKKLISLFI KCVIMALILS LFLIFLLFLG FAALVLLHFL ITSTAFHRRH 60
RRRHHHRFPA TPTSSFDLPC VSYCGSQQSA RDCAICLEGF KDGEICRKLP DCGHLFHVKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAATTC CGATTCAAAA TCAAGAAACT AAGCCGAAAA AATTGATTTC CCTATTCATA 60
AAATGTGTAA TCATGGCTTT AATCCTCTCC CTTTTCTTGA TTTTCCTTCT TTTCCTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101261425

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005902	Arabidopsis lyrata	53.97	3.00e-17	80.50
IUUC-Ath-006633	Arabidopsis thaliana	57.14	8.00e-18	82.40
IUUC-Bol-015588	Brassica oleracea	50.00	1.00e-17	81.30
IUUC-Bra-017231	Brassica rapa	50.00	2.00e-17	80.50
IUUC-Dme-032121	Drosophila melanogaster	49.12	1.00e-11	61.60
IUUC-Mtr-058539	Medicago truncatula	47.83	2.00e-15	74.30
IUUC-Pop-099663	Populus trichocarpa	49.30	1.00e-15	75.10
IUUC-Ppe-101566	Prunus persica	50.00	7.00e-18	82.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence