iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006446

Ensembl Protein ID

fgenesh2_kg.7__897__AT4G32551.1

UniProt Accession

D7MA30; D7MA30_ARALL

Genbank Protein ID

EFH45523.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

LUG; ARALYDRAFT_491464

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__897__AT4G32551.1	fgenesh2_kg.7__897__AT4G32551.1	fgenesh2_kg.7__897__AT4G32551.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-23	80.7	681	710
UBD/Beta-Prp	8.30e-48	163.7	616	769

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++  +l+++s D+t++vWD
   Q: 681  HTAMITDIRFsPSqLRLATSSFDKTVRVWD 710
           88889*****977689************** PP

UBD/Beta-Prp

   S: 31   dgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           d+ ++  dv++g +   + s+   + +vt++ fs+dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsps
   Q: 616  DAVTRCMDVSKGFTfneVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPS 693
           555566666666665557788888999*************************************************** PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgght 180
           + +l++ s d+t+rvwd +++  +  t+ gh+++v+++ +hp + +l+ s+ +D+ +r W++++g++ r  +gg t
   Q: 694  QLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPVKdDLICSCDNDNEIRYWSINNGSCTRVYKGGST 769
           *****************987655545****************999************************9988665 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKATAQ AFQAEGKVSP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQMIKAREQQ LQQSQHPQVS QQQQQQQQQQ IQMQQLLLQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGATGCTT TCTTCTTCTT CTTTCTCTCT CTAAAAACTT TGTTTCATTC TCTCTCTCTC 60
TAATTTTCTT TTTGGTTTTT GGTTTGGCTT ATTTGAAGTG TTTAATCTTA TTCAGTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

aly:ARALYDRAFT_491464

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	61.92	2.00e-137	482.00
IUUC-Atr-002973	Amborella trichopoda	67.88	0.00e+00	790.00
IUUC-Ath-006594	Arabidopsis thaliana	93.38	0.00e+00	1280.00
IUUC-Bdi-014395	Brachypodium distachyon	66.14	2.00e-162	565.00
IUUC-Bol-015720	Brassica oleracea	88.12	0.00e+00	1146.00
IUUC-Bra-017481	Brassica rapa	88.59	0.00e+00	1190.00
IUUC-Gma-043258	Glycine max	72.82	0.00e+00	926.00
IUUC-Hvu-047499	Hordeum vulgare	62.61	1.00e-147	515.00
IUUC-Lpe-051536	Leersia perrieri	65.53	8.00e-158	550.00
IUUC-Mtr-058613	Medicago truncatula	72.29	0.00e+00	931.00
IUUC-Mac-064770	Musa acuminata	61.98	0.00e+00	827.00
IUUC-Oba-075419	Oryza barthii	54.53	0.00e+00	665.00
IUUC-Obr-076118	Oryza brachyantha	56.38	0.00e+00	714.00
IUUC-Ogl-077064	Oryza glaberrima	57.33	0.00e+00	734.00
IUUC-Ogu-078816	Oryza glumaepatula	54.13	0.00e+00	650.00
IUUC-Oin-079642	Oryza indica	65.76	7.00e-154	537.00
IUUC-Olo-080338	Oryza longistaminata	64.40	5.00e-147	514.00
IUUC-Ome-081901	Oryza meridionalis	65.08	1.00e-147	517.00
IUUC-Oni-082753	Oryza nivara	54.53	0.00e+00	667.00
IUUC-Opu-083283	Oryza punctata	53.07	0.00e+00	636.00
IUUC-Oru-084538	Oryza rufipogon	54.67	0.00e+00	663.00
IUUC-Osa-086142	Oryza sativa	57.60	0.00e+00	737.00
IUUC-Ppa-095985	Physcomitrella patens	64.68	1.00e-156	545.00
IUUC-Pop-098994	Populus trichocarpa	74.18	0.00e+00	994.00
IUUC-Ppe-102018	Prunus persica	72.52	0.00e+00	945.00
IUUC-Smo-108724	Selaginella moellendorffii	53.61	0.00e+00	704.00
IUUC-Sit-109866	Setaria italica	66.21	1.00e-153	536.00
IUUC-Sly-110921	Solanum lycopersicum	72.58	0.00e+00	885.00
IUUC-Sbi-113848	Sorghum bicolor	65.83	2.00e-155	542.00
IUUC-Tca-121720	Theobroma cacao	74.70	0.00e+00	930.00
IUUC-Tae-124192	Triticum aestivum	66.14	2.00e-157	548.00
IUUC-Tur-126743	Triticum urartu	54.96	3.00e-129	455.00
IUUC-Vvi-131473	Vitis vinifera	73.35	0.00e+00	964.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence