iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002628

Ensembl Protein ID

ERN15628

UniProt Accession

U5D5L2; U5D5L2_AMBTC

Genbank Protein ID

ERN15628.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392502

Gene Name

AMTR_s00048p00190790

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00048p00190790	ERN15628	ERN15628

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-26	90.0	247	277
E3 adaptor/Cullin RING/APC_C/CDC20	1.10e-127	426.0	111	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +v++l++ ++ + l+sG++D+ +++WD
   Q: 247  GHQQEVCGLKWsNSgKQLASGGNDNILHIWD 277
           8**********95569*************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tghsarv 99
           p++ ldapel dd+ylnLldWs  nvla+aLg++vylw+ ++g+ s+l+ + ee+  vts++w ++g+++avG +++ v+++D++++k++rtl  gh  r+
   Q: 111  PQRTLDAPELLDDYYLNLLDWSCGNVLAIALGNTVYLWDGSNGSTSELTTIdEENGPVTSINWAPDGKHIAVGLNNSDVHLWDATSTKQLRTLrGGHRGRI 211
           6799***********************************************888999************************************889***** PP
   S: 100  gaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse....PlkkfkehkaavkaiawsPwqkslLa 196
            +L+Wn+++l++G++dg i  +dvr++ + ++t+++h+qevCGlkw++++k+LasGGnDn +++wd+s s+    Pl++ ++h aavka+aw+P+q++lLa
   Q: 212  PSLAWNSHILTTGGHDGLIINNDVRIRSHIVETYRGHQQEVCGLKWSNSGKQLASGGNDNILHIWDQSLSNssnsPLHRLEDHLAAVKALAWCPFQSNLLA 312
           ******************************************************************875545567************************** PP
   S: 197  sGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklf 297
           sGGG  Drcikfwnt tga+++++dtgsqvcsllwsk+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl +a spdg ++++a++Detlrfw++f
   Q: 313  SGGGGGDRCIKFWNTHTGACINSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKLAELNGHTSRVLFMAQSPDGCTVASAGADETLRFWQVF 413
           ****************************************************************************************************9 PP
   S: 298  dk 299
             
   Q: 414  GA 415
           65 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MKQERRYPLH EQMVPRRPSS RQQYSDRFIP DRRAMDLDVA RYMLMDSKKE NTTPGSPSKE 60
AYRKRLAEIV FQNRTRILAF KSKPPTLERA YEEVLSDKHQ VRSAKTRRHI PQRTLDAPEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCAAG AGAGGCGTTA CCCTCTTCAT GAGCAAATGG TTCCAAGAAG ACCTTCTTCA 60
AGGCAACAAT ACGTAAGAAA TTTTTGCTTG GTAGCCTGTT CATTATGAAA CTCTCCAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	67.63	8.00e-171	592.00
IUUC-Aly-006253	Arabidopsis lyrata	68.81	6.00e-172	595.00
IUUC-Ath-006795	Arabidopsis thaliana	68.58	5.00e-172	596.00
IUUC-Bdi-014344	Brachypodium distachyon	68.59	4.00e-171	592.00
IUUC-Bol-015368	Brassica oleracea	68.83	4.00e-173	601.00
IUUC-Bra-016738	Brassica rapa	67.40	5.00e-170	590.00
IUUC-Lpe-050954	Leersia perrieri	68.09	3.00e-166	576.00
IUUC-Mtr-057725	Medicago truncatula	69.20	3.00e-172	596.00
IUUC-Mac-064861	Musa acuminata	72.08	9.00e-177	611.00
IUUC-Oba-075514	Oryza barthii	68.82	1.00e-168	585.00
IUUC-Obr-076018	Oryza brachyantha	69.12	4.00e-168	583.00
IUUC-Ogl-077254	Oryza glaberrima	69.05	3.00e-169	587.00
IUUC-Ogu-078562	Oryza glumaepatula	68.82	8.00e-169	585.00
IUUC-Oin-080094	Oryza indica	69.05	3.00e-169	587.00
IUUC-Olo-080449	Oryza longistaminata	70.05	2.00e-171	594.00
IUUC-Oni-082243	Oryza nivara	69.05	3.00e-169	587.00
IUUC-Opu-084007	Oryza punctata	67.34	2.00e-168	583.00
IUUC-Oru-084357	Oryza rufipogon	68.82	1.00e-168	584.00
IUUC-Osa-086094	Oryza sativa	68.82	8.00e-169	585.00
IUUC-Ppa-095932	Physcomitrella patens	62.96	9.00e-142	495.00
IUUC-Pop-099651	Populus trichocarpa	68.68	2.00e-169	587.00
IUUC-Ppe-101865	Prunus persica	70.14	2.00e-170	590.00
IUUC-Sit-110032	Setaria italica	70.02	6.00e-168	582.00
IUUC-Sly-111202	Solanum lycopersicum	71.19	2.00e-170	590.00
IUUC-Sbi-114207	Sorghum bicolor	70.57	5.00e-173	599.00
IUUC-Tae-124932	Triticum aestivum	68.03	6.00e-171	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence