iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005922

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_912943

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_700685.1	scaffold_700685.1	scaffold_700685.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	4.20e-30	104.3	103	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc+t+admikgk peeiR++Fni+nDftpeEe++vR+EnqWA
   Q: 103  KSLLDLTCQTIADMIKGKNPEEIRTLFNIKNDFTPEEEEEVRRENQWA 150
           89*********************************************9 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSTMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCAAN GIPLANVTSK TLAKVIEYCK 60
KHHVDEANPI SEDELKKWDT EFMETDQSTI FDLILAANYL NIKSLLDLTC QTIADMIKGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTACTCCAC AAAGAACAAA CAATGTCGTC GACGATGATC GTGTTGATGA GCTCCGATGG 60
TCAGTCGTTT GAGGTGGAAG AAGCGGTAGC AATCCAATCT CAGACCATAG CACATATGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_912943

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence