iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099029

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTR_0004s21930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s21930	POPTR_0004s21930.1	POPTR_0004s21930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-09	38.7	86	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +++++     + +C Hvfh+dC+ kw      ++++f+CPlCr
   Q: 86   CSICLVELEKEdavSQLSRCMHVFHTDCIDKW-----IQRGHFTCPLCR 129
           ********66544344677*************.....79*********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MFSVLMCSHQ SSGICMATII FYTCILIPLR QIKQTLYSII VLLTSSSSRL EPVENIEYCC 60
SRRRSQQRRL LVACRFEKVQ KKDVSCSICL VELEKEDAVS QLSRCMHVFH TDCIDKWIQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATGTGATG ACGTGTGGAC TTTTAATTTA TTTTTCATTC TCCTTGCCAA TTATCAATAT 60
TAATTAATAA ACAAATAGAA GAATCGACAC TCTCCAACTT CCGGAAGTTA AGAGTCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s21930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	36.89	3.00e-18	83.20
IUUC-Ath-006708	Arabidopsis thaliana	36.89	4.00e-18	83.20
IUUC-Bol-016104	Brassica oleracea	35.77	4.00e-18	85.50
IUUC-Bra-017196	Brassica rapa	34.09	2.00e-16	80.10
IUUC-Gma-043261	Glycine max	41.91	3.00e-23	99.80
IUUC-Mtr-058301	Medicago truncatula	57.14	3.00e-15	73.20
IUUC-Ppe-101276	Prunus persica	41.86	1.00e-22	98.60
IUUC-Sly-111434	Solanum lycopersicum	34.45	1.00e-15	74.30
IUUC-Stu-112159	Solanum tuberosum	41.86	2.00e-19	87.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence