iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017900

Ensembl Protein ID

Bra010705.1-P

UniProt Accession

M4D2K5; M4D2K5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010705	Bra010705.1	Bra010705.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-08	34.5	249	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +v+Ce+C+ewfHp C + ++e  ++ ++ ++C++C+
   Q: 249  FC-KCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEAAKKLDH-FYCEECS 296
           78.7999***9**********************888888887.******7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MENISGLMAF DMGELRNNLP KKRGLSRFYS GKARSYVCIF DVKCLEDLKK PTQLLDIDDD 60
DVAYTKRKKK NKQSSSSSFS AAVNSNVNYQ NYPCRRVSSS THCSSPCMPK QKAQKKQLKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAACA TAAGTGGGTT GATGGCTTTT GACATGGGGG AGCTAAGAAA CAACCTTCCC 60
AAAAAGTACA TCCTGAAGAA TGATCTCATT GATTATGTTT CTTGTTTAAA GTTATAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004346	Anolis carolinensis	35.71	4.00e-10	60.50
IUUC-Aly-005443	Arabidopsis lyrata	89.08	4.00e-117	413.00
IUUC-Ath-006906	Arabidopsis thaliana	87.77	4.00e-115	406.00
IUUC-Ago-007912	Ashbya gossypii	43.33	2.90e-02	33.10
IUUC-Ame-010945	Astyanax mexicanus	30.95	2.00e-09	58.50
IUUC-Bol-015574	Brassica oleracea	97.82	4.00e-129	452.00
IUUC-Cel-018283	Caenorhabditis elegans	27.47	7.00e-09	57.40
IUUC-Cne-026894	Cryptococcus neoformans	41.67	1.00e-09	58.20
IUUC-Gma-043965	Glycine max	73.76	2.00e-91	328.00
IUUC-Lpe-051138	Leersia perrieri	67.16	3.00e-84	303.00
IUUC-Mtr-058621	Medicago truncatula	72.55	2.00e-89	321.00
IUUC-Oba-075855	Oryza barthii	69.35	6.00e-85	306.00
IUUC-Obr-076353	Oryza brachyantha	71.12	7.00e-83	301.00
IUUC-Ogl-077547	Oryza glaberrima	72.11	9.00e-84	302.00
IUUC-Oin-079179	Oryza indica	69.46	5.00e-86	310.00
IUUC-Olo-080461	Oryza longistaminata	70.68	9.00e-84	303.00
IUUC-Ome-081714	Oryza meridionalis	69.65	3.00e-86	310.00
IUUC-Oni-082099	Oryza nivara	69.65	3.00e-86	310.00
IUUC-Opu-083906	Oryza punctata	64.36	6.00e-80	289.00
IUUC-Osa-085620	Oryza sativa	69.46	5.00e-86	310.00
IUUC-Olu-087802	Ostreococcus lucimarinus	44.64	4.00e-42	163.00
IUUC-Pop-098853	Populus trichocarpa	72.77	1.00e-87	315.00
IUUC-Pca-100779	Procavia capensis	37.31	1.00e-10	62.40
IUUC-Sja-107734	Schizosaccharomyces japonicus	40.43	2.00e-06	48.90
IUUC-Ssl-108594	Sclerotinia sclerotiorum	29.47	2.00e-05	45.40
IUUC-Sit-110445	Setaria italica	68.47	7.00e-85	305.00
IUUC-Tca-121689	Theobroma cacao	74.75	3.00e-89	320.00
IUUC-Tre-122041	Trichoderma reesei	32.56	2.00e-05	45.40
IUUC-Uma-129425	Ustilago maydis	48.94	1.00e-07	52.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence