iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017757

Ensembl Protein ID

Bra028874.1-P

UniProt Accession

M4EJA8; M4EJA8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra028874	Bra028874.1	Bra028874.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-29	99.2	488	525
UBD/Beta-Prp	6.10e-41	141.5	475	705

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d+v +l++  ++ll+s+s D+t+++WD+ t+ +lk
   Q: 488  GHLDDVLDLSWsRSNLLLSSSKDKTVRLWDIETQSCLK 525
           8**********8559*******************9986 PP

UBD/Beta-Prp

   S: 36   vwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcle 130
           v+++++ k + s+ gh + v ++++s++  +l+++s+D+t+++wd++t +c+  +  h+d+v++++f+p + d+++sGs d  ir+w+++++q++e
   Q: 475  VFSLSD-KPMCSFTGHLDDVLDLSWSRSN-LLLSSSKDKTVRLWDIETQSCLKLFA-HNDYVTCVHFNPlDEDYFISGSLDAKIRIWNISNRQVVE 567
           556666.4457999**************6.***********************999.************777***********************9 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.......tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtl 218
              +  +++v+ v++ pdg+  + Gs  + +rl++ +  kl +t        ++++ ++++  +f++    e++  s d+++++ d   +e ++++
   Q: 568  --WNDLNEMVTAVCYTPDGQAAFVGSHKGNCRLYSAEDCKLEQTNhidlqnkKKAQAKKITAFQFSPINpAEVLVTSADSRIRILDG--TELIQKF 659
           ..888899****************************9999999999999999788999999999*9966599*************98..667**** PP
   S: 219  nghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +g +++ +++ +s   + ++++++s+D ++++W  ++ ++   +++++
   Q: 660  RGFKNTCSQMTASytLDAKHIICASEDSQVYVW--KHEEPRLGITGRK 705
           ******99999998889****************..6777766666655 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MANRDGVNGK LERKKTMTMN WAGLGDVEDD DDHFFESSNR ISTVVPVDLA SSSDEEGEFD 60
DCRISFSRPP PPEPNNMSPD YDIWMSAPGS ITERRRKLLN GMGIESKRSM LGAISIQRVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAATC GAGACGGCGT GAACGGGAAA CTCGAACGGA AGAAGACGAT GACGATGAAC 60
TGGGCGGGGT TAGGCGACGT TGAAGACGAC GACGATCACT TCTTCGAGAG CTCCAACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007008	Arabidopsis thaliana	76.60	0.00e+00	1159.00
IUUC-Bol-016298	Brassica oleracea	95.78	0.00e+00	1391.00
IUUC-Gma-042939	Glycine max	48.48	0.00e+00	768.00
IUUC-Mtr-057965	Medicago truncatula	49.64	0.00e+00	763.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence