iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111812

Ensembl Protein ID

Solyc10g084430.1.1

UniProt Accession

K4D3M9; K4D3M9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g084430.1	Solyc10g084430.1.1	Solyc10g084430.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-07	30.9	227	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++   +d ++ lpC H+fh +C+  w       +k+ +CP Cr
   Q: 227  CVICKEEMnlgRD-VCKLPCDHFFHWKCILPW------LKKNNTCPCCR 268
           ******9999555.******************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MIEHQKSLEA IVMEVLSTLT PLQLTKFTHH FSSLYHHNRH RIFSLLSSPT LFSLTLNHLN 60
SLSLHRKSLL IARYLLSKLA ILGYFMEKNM ILLPSSSIIT MSLWDVDVVS MLLLLCELHQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGAAC ATCAAAAATC CTTAGAAGCC ATAGTCATGG AAGTTCTTTC TACCTTAACC 60
CCTCTTCAAC TCACAAAATT CACCCACCAC TTCTCCTCCC TCTACCACCA CAATCGCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101254650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	32.02	2.00e-28	119.00
IUUC-Aly-005538	Arabidopsis lyrata	47.35	6.00e-46	176.00
IUUC-Ath-006921	Arabidopsis thaliana	47.00	2.00e-45	175.00
IUUC-Bdi-014905	Brachypodium distachyon	33.33	2.00e-22	98.60
IUUC-Bol-016141	Brassica oleracea	47.15	2.00e-41	161.00
IUUC-Bra-017782	Brassica rapa	46.63	2.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence