iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015621

Ensembl Protein ID

Bo3g003920.1

UniProt Accession

A0A0D3B007; A0A0D3B007_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g003920	Bo3g003920.1	Bo3g003920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.50e-70	238.9	233	556

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p++++  +lq+lf +l ++++++v+++el+k++++    +++++q+D+qE+ +
   Q: 233  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDAPTASIPLALQSLFYKL-QYNDTSVATKELTKSFGWDT--YDSFMQHDVQELNR 321
           6******************************.....555555789***************.88999************877..67************ PP
   S: 98   flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesf 194
           +l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v+g +     ++  +++++
   Q: 322  VLCEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCK-----DVYASFDKY 387
           **********..........................7899*******************************************.....9******** PP
   S: 195  tkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavvvHs 287
           ++ e+leg+nky+ e   ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++  + + ++++ Y L++v+vHs
   Q: 388  VEVERLEGDNKYHAEGH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDredgKYLSP-DADRSVRNLYTLHSVLVHS 482
           *************9985.79***********************************************9777666666.666678************* PP
   S: 288  GslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYkr 337
           G++++GHY+a+++   +++W++fdD++Vt+ + ++ l e+                        s+aY+l+Y r
   Q: 483  GGVHGGHYYAFIRPtLSDQWYKFDDERVTKEDLKRALDEQYggeeelpqtnpgfnnppfkftkySNAYMLVYIR 556
           *************945677*************9999997669******************************87 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

FEAEKESNKK NLSRLYISLV TLIFICSFVL SISPSMTMMT PPPVDQEDEE MLVPHSDVVD 60
GPAQPMEVSE AETAVSTVEN QPAEEPPTLK FTWTIPNFSR QNTRKLYSDV FVVGGYKWRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGAAGCCG AGAAAGAGAG TAACAAAAAG AATTTGAGCA GATTGTACAT CTCTCTAGTC 60
ACTTTGATTT TTATCTGTTC GTTCGTTCTC TCGATCTCAC CGTCAATGAC TATGATGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000761	Aegilops tauschii	76.51	0.00e+00	1696.00
IUUC-Atr-003067	Amborella trichopoda	85.67	0.00e+00	1488.00
IUUC-Aly-006427	Arabidopsis lyrata	95.52	0.00e+00	2126.00
IUUC-Ath-006591	Arabidopsis thaliana	95.16	0.00e+00	2094.00
IUUC-Bra-017080	Brassica rapa	99.37	0.00e+00	2225.00
IUUC-Dse-031433	Dothistroma septosporum	35.73	6.00e-172	598.00
IUUC-Hvu-047749	Hordeum vulgare	81.86	0.00e+00	1527.00
IUUC-Loc-052234	Lepisosteus oculatus	34.50	4.00e-152	532.00
IUUC-Mac-064796	Musa acuminata	83.35	0.00e+00	1860.00
IUUC-Oba-075823	Oryza barthii	78.38	0.00e+00	1714.00
IUUC-Obr-076514	Oryza brachyantha	83.26	0.00e+00	1815.00
IUUC-Ogl-077131	Oryza glaberrima	82.86	0.00e+00	1798.00
IUUC-Ome-081879	Oryza meridionalis	82.16	0.00e+00	1790.00
IUUC-Oru-085109	Oryza rufipogon	80.35	0.00e+00	1727.00
IUUC-Osa-085418	Oryza sativa	70.76	0.00e+00	1320.00
IUUC-Olu-087874	Ostreococcus lucimarinus	44.85	0.00e+00	907.00
IUUC-Oga-089059	Otolemur garnettii	34.68	7.00e-142	498.00
IUUC-Pop-100083	Populus trichocarpa	86.65	0.00e+00	1936.00
IUUC-Pva-102472	Pteropus vampyrus	37.16	6.00e-161	561.00
IUUC-Pyt-104581	Pyrenophora triticirepentis	37.63	5.00e-174	604.00
IUUC-Sit-110268	Setaria italica	82.17	0.00e+00	1797.00
IUUC-Sbi-114424	Sorghum bicolor	82.35	0.00e+00	1816.00
IUUC-Tca-121501	Theobroma cacao	87.38	0.00e+00	1941.00
IUUC-Tae-123032	Triticum aestivum	81.32	0.00e+00	1825.00
IUUC-Tur-126501	Triticum urartu	73.23	0.00e+00	1579.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence