iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074472

Ensembl Protein ID

ENSOCUP00000002718.3

UniProt Accession

G1SJ30; G1SJ30_RABIT

Genbank Protein ID

ENSOCUP00000002718

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02005743

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000003126.3	ENSOCUT00000003130.3	ENSOCUP00000002718.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-16	60.2	124	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v+c+++ +d + l s+sdD+ i  W++ t+++
   Q: 124  GHDNRVNCIQWhQDsGCLYSCSDDKHIVEWNVQTCKV 160
           8***********7789***********9999988776 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAAGGGGSGD PLAPAGVPCA FSPHGQAYFA LASTDGHLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPV RLQAKESPQR KKRKSEALGT SNQTDLLALG TTVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTGAAACC CAGAGAGAGA GAGAGAGAGA TCTCCCGTTG GCTGTTTCAC TCCCCATCAA 60
CAGCTAGGGT TGGACCAGGT CGAAGCCAGG AGCGTGGATC TCAATCCAGA TCTCCCACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	92.20	0.00e+00	1072.00
IUUC-Atr-002533	Amborella trichopoda	21.56	1.00e-23	104.00
IUUC-Apl-003242	Anas platyrhynchos	72.87	0.00e+00	784.00
IUUC-Aca-004607	Anolis carolinensis	70.76	0.00e+00	845.00
IUUC-Aly-006074	Arabidopsis lyrata	25.09	3.00e-15	77.00
IUUC-Ath-007222	Arabidopsis thaliana	25.09	6.00e-15	75.90
IUUC-Ame-011014	Astyanax mexicanus	54.97	2.00e-171	595.00
IUUC-Bta-012605	Bos taurus	91.15	0.00e+00	1082.00
IUUC-Bdi-014072	Brachypodium distachyon	21.54	1.00e-18	88.20
IUUC-Bol-016255	Brassica oleracea	28.31	4.00e-22	99.80
IUUC-Bra-016850	Brassica rapa	27.61	2.00e-23	104.00
IUUC-Cja-019620	Callithrix jacchus	94.16	0.00e+00	1114.00
IUUC-Cfa-020520	Canis familiaris	91.82	0.00e+00	1085.00
IUUC-Cpo-022456	Cavia porcellus	89.35	0.00e+00	1046.00
IUUC-Cho-024726	Choloepus hoffmanni	90.34	0.00e+00	1029.00
IUUC-Cin-025761	Ciona intestinalis	36.01	3.00e-96	346.00
IUUC-Dre-028051	Danio rerio	54.56	4.00e-173	601.00
IUUC-Dno-030031	Dasypus novemcinctus	90.98	0.00e+00	1076.00
IUUC-Dme-031653	Drosophila melanogaster	27.65	4.00e-48	186.00
IUUC-Ete-032863	Echinops telfairi	80.29	1.00e-87	317.00
IUUC-Eca-033243	Equus caballus	92.22	0.00e+00	928.00
IUUC-Eeu-034970	Erinaceus europaeus	86.73	0.00e+00	773.00
IUUC-Fca-036009	Felis catus	91.53	0.00e+00	1075.00
IUUC-Fal-037264	Ficedula albicollis	71.10	0.00e+00	761.00
IUUC-Gmo-039124	Gadus morhua	56.18	7.00e-177	613.00
IUUC-Gga-040862	Gallus gallus	71.84	0.00e+00	846.00
IUUC-Gac-041468	Gasterosteus aculeatus	55.59	0.00e+00	644.00
IUUC-Gma-042795	Glycine max	20.56	7.00e-14	72.40
IUUC-Ggo-044432	Gorilla gorilla	94.32	0.00e+00	1117.00
IUUC-Hsa-047036	Homo sapiens	94.32	0.00e+00	1115.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	92.49	0.00e+00	1087.00
IUUC-Lch-049553	Latimeria chalumnae	65.20	0.00e+00	740.00
IUUC-Laf-053462	Loxodonta africana	89.65	0.00e+00	1099.00
IUUC-Mcc-055239	Macaca mulatta	94.82	0.00e+00	1120.00
IUUC-Mtr-057977	Medicago truncatula	21.21	2.00e-16	80.50
IUUC-Mga-060079	Meleagris gallopavo	73.06	0.00e+00	776.00
IUUC-Mmr-061472	Microcebus murinus	92.65	0.00e+00	1102.00
IUUC-Mdo-061972	Monodelphis domestica	80.53	0.00e+00	986.00
IUUC-Mmu-063354	Mus musculus	86.96	0.00e+00	1036.00
IUUC-Mac-065064	Musa acuminata	23.27	1.00e-15	77.40
IUUC-Mpu-066877	Mustela putorius furo	91.49	0.00e+00	1085.00
IUUC-Mlu-067476	Myotis lucifugus	88.80	0.00e+00	1046.00
IUUC-Nle-069119	Nomascus leucogenys	94.32	0.00e+00	1114.00
IUUC-Ont-072093	Oreochromis niloticus	56.03	0.00e+00	681.00
IUUC-Oan-072944	Ornithorhynchus anatinus	76.52	0.00e+00	824.00
IUUC-Oba-075009	Oryza barthii	21.16	1.00e-13	71.60
IUUC-Ogl-077189	Oryza glaberrima	19.87	9.00e-14	72.00
IUUC-Oin-079064	Oryza indica	21.16	2.00e-13	71.20
IUUC-Opu-083604	Oryza punctata	20.68	2.00e-13	70.50
IUUC-Oru-084620	Oryza rufipogon	21.16	1.00e-13	71.20
IUUC-Osa-085345	Oryza sativa	20.68	7.00e-14	72.40
IUUC-Ola-086626	Oryzias latipes	54.74	0.00e+00	663.00
IUUC-Oga-087911	Otolemur garnettii	92.06	0.00e+00	1085.00
IUUC-Ptr-091603	Pan troglodytes	93.99	0.00e+00	1112.00
IUUC-Pan-092569	Papio anubis	94.82	0.00e+00	1120.00
IUUC-Pma-094287	Petromyzon marinus	53.28	0.00e+00	633.00
IUUC-Ppa-095327	Physcomitrella patens	27.70	3.00e-27	116.00
IUUC-Pfo-097292	Poecilia formosa	55.59	0.00e+00	639.00
IUUC-Pab-097878	Pongo abelii	94.58	0.00e+00	1102.00
IUUC-Pop-099418	Populus trichocarpa	21.98	2.00e-18	87.00
IUUC-Pca-100941	Procavia capensis	83.89	0.00e+00	966.00
IUUC-Ppe-101779	Prunus persica	22.03	1.00e-19	91.70
IUUC-Pva-102493	Pteropus vampyrus	83.61	0.00e+00	981.00
IUUC-Rno-105084	Rattus norvegicus	87.31	0.00e+00	1026.00
IUUC-Sha-107486	Sarcophilus harrisii	80.37	0.00e+00	983.00
IUUC-Smo-108825	Selaginella moellendorffii	22.74	1.00e-19	91.30
IUUC-Sit-110825	Setaria italica	20.82	3.00e-17	83.60
IUUC-Sly-111365	Solanum lycopersicum	22.30	4.00e-19	89.70
IUUC-Stu-112812	Solanum tuberosum	22.84	5.00e-18	85.90
IUUC-Sar-113326	Sorex araneus	92.53	4.00e-138	484.00
IUUC-Sbi-114426	Sorghum bicolor	21.94	9.00e-21	95.10
IUUC-Tgu-116726	Taeniopygia guttata	69.32	0.00e+00	826.00
IUUC-Tru-117848	Takifugu rubripes	54.65	0.00e+00	635.00
IUUC-Tsy-119091	Tarsius syrichta	65.63	1.00e-134	473.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.32	0.00e+00	637.00
IUUC-Tca-121576	Theobroma cacao	25.00	3.00e-15	76.60
IUUC-Tae-125105	Triticum aestivum	21.55	1.00e-18	87.80
IUUC-Tbe-127832	Tupaia belangeri	92.37	0.00e+00	945.00
IUUC-Ttr-128812	Tursiops truncatus	92.75	0.00e+00	944.00
IUUC-Xma-133557	Xiphophorus maculatus	55.59	0.00e+00	641.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence