iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__1209__AT5G12310.1	fgenesh2_kg.6__1209__AT5G12310.1	fgenesh2_kg.6__1209__AT5G12310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.3	43	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ +  ++  +v +C H+++ +C+ +w     s + + +CP C+
   Q: 43   CAICLDTIplQETAMVKGCEHAYCVTCILRW----ASYKEKPTCPQCK 86
           ******776666588999*************....8889999*****6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTSSIQIVDE QQVDVLSLHQ DQDEKKTQQV FNELSFGNHG GCCAICLDTI PLQETAMVKG 60
CEHAYCVTCI LRWASYKEKP TCPQCKLPFD FLNVHRALDG SVEDFMFEES VCLLLRASWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAATATTA TTTTTATTTT GGGTCGCCGC TTGATTTTCT GGTGGAGAAG TCGTAATCGT 60
TAAATTAGGG TCTTCTCTTC TTCATCTTCT TCTACATCTC CTCGGCCGTT TCCTACGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_488075

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002853	Amborella trichopoda	56.95	2.00e-43	167.00
IUUC-Ath-007240	Arabidopsis thaliana	94.51	5.00e-105	372.00
IUUC-Bdi-014704	Brachypodium distachyon	59.59	1.00e-44	172.00
IUUC-Bol-015356	Brassica oleracea	78.17	1.00e-78	285.00
IUUC-Cel-018658	Caenorhabditis elegans	38.89	2.00e-06	47.00
IUUC-Cpo-021419	Cavia porcellus	34.43	3.00e-06	47.40
IUUC-Cre-022875	Chlamydomonas reinhardtii	65.38	2.00e-27	113.00
IUUC-Csa-023947	Chlorocebus sabaeus	36.07	3.00e-06	47.80
IUUC-Cho-024396	Choloepus hoffmanni	36.36	5.00e-07	50.10
IUUC-Cme-027236	Cyanidioschyzon merolae	35.80	1.00e-08	52.40
IUUC-Dno-029714	Dasypus novemcinctus	40.43	1.00e-05	45.80
IUUC-Ggo-044786	Gorilla gorilla	38.78	1.00e-05	44.30
IUUC-Hsa-046200	Homo sapiens	36.07	2.00e-07	46.60
IUUC-Lpe-050939	Leersia perrieri	57.69	1.00e-51	195.00
IUUC-Mlu-067644	Myotis lucifugus	29.47	5.00e-06	47.00
IUUC-Oba-075008	Oryza barthii	60.39	5.00e-48	183.00
IUUC-Obr-076867	Oryza brachyantha	58.05	3.00e-49	187.00
IUUC-Ogl-077681	Oryza glaberrima	61.04	1.00e-48	185.00
IUUC-Ogu-078356	Oryza glumaepatula	61.04	1.00e-48	185.00
IUUC-Oin-079949	Oryza indica	61.04	1.00e-48	185.00
IUUC-Olo-080990	Oryza longistaminata	60.39	1.00e-47	182.00
IUUC-Ome-081618	Oryza meridionalis	61.69	7.00e-49	186.00
IUUC-Oni-082491	Oryza nivara	61.04	1.00e-48	185.00
IUUC-Opu-083979	Oryza punctata	57.82	7.00e-47	179.00
IUUC-Osa-085324	Oryza sativa	61.04	1.00e-48	185.00
IUUC-Olu-087720	Ostreococcus lucimarinus	37.25	8.00e-14	70.10
IUUC-Ptr-091454	Pan troglodytes	38.78	1.00e-05	44.30
IUUC-Pan-092016	Papio anubis	36.84	2.00e-05	43.90
IUUC-Pab-098106	Pongo abelii	38.78	1.00e-05	44.30
IUUC-Pop-099205	Populus trichocarpa	55.46	6.00e-59	219.00
IUUC-Ppe-101850	Prunus persica	53.67	6.00e-55	206.00
IUUC-Rno-105277	Rattus norvegicus	38.30	4.00e-05	42.70
IUUC-Sit-110148	Setaria italica	55.48	9.00e-47	179.00
IUUC-Sly-110879	Solanum lycopersicum	56.91	7.00e-53	199.00
IUUC-Stu-112540	Solanum tuberosum	56.91	4.00e-53	200.00
IUUC-Sbi-114796	Sorghum bicolor	57.52	1.00e-39	155.00
IUUC-Tca-121633	Theobroma cacao	56.36	7.00e-57	212.00
IUUC-Uma-129420	Ustilago maydis	34.33	6.00e-05	41.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence