iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090749

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03106552

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000007621.5	ENSPTRT00000014053.5	ENSPTRP00000053800.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-55	182.7	518	557
UBD/Beta-Prp	8.20e-98	327.2	412	639

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W l ++ +lk+
   Q: 518  GHRRGLWCVQFsPMdQVLATASADGTIKLWALQDFSCLKT 557
           8999*******977789*******************9986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...........tgkcvhtlk....ghedsvlslsfspsgdklvsGshdr 116
           ++++ sgh+  v ++++s+ ++ +lvtgs+D t+k+w+l            +g+++   +     h++++ s+++ p+++ l++Gs+dr
   Q: 412  CVAQGSGHTHSVGTICCSRLKEsFLVTGSQDCTVKLWPLPkallskntapdNGPILLQAQttqrCHDKDINSVAIAPNDKLLATGSQDR 500
           5677799**********998778**************5555566666666688888877766668************************ PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           t+++w l++ q l  ++sgh++  +cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s + dg vk
   Q: 501  TAKLWALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLVK 587
           *************9.*********************************************9.*************************** PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdl 256
           lw ++++ecvrtl +h+d v+ ++ s+ d+r ++g+sD  + +W d++  + 
   Q: 588  LWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVILWkDVTEAEQ 639
           ********************************************87766554 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MTETAAGVGR FKTNYAVERK IEPFYKGGKA QLDQTGQHLF CVCGTRVNIL EVASGAVLRS 60
LEQEDQEDIT AFDLSPDNEV LVTASRALLL AQWAWQEGSV TRLWKAIHTA PVATMAFDPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGTGTGG CGTTCTGTGA AGAGTTCGGT GCTAACCTCC CTCACGCGGC GGTGGCTGCC 60
GGGACCCTAG CAGGTTTCAG CTGGAGCGGC GGCGGCGGCA ACATGACAGA GACCGCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.50	4.00e-145	508.00
IUUC-Aml-002376	Ailuropoda melanoleuca	88.29	0.00e+00	1380.00
IUUC-Atr-002486	Amborella trichopoda	37.79	1.00e-158	553.00
IUUC-Apl-003519	Anas platyrhynchos	61.04	0.00e+00	898.00
IUUC-Aca-004363	Anolis carolinensis	56.22	3.00e-147	514.00
IUUC-Aly-006152	Arabidopsis lyrata	34.97	5.00e-148	518.00
IUUC-Ath-006966	Arabidopsis thaliana	34.91	3.00e-147	515.00
IUUC-Ago-007746	Ashbya gossypii	30.25	8.00e-108	384.00
IUUC-Acl-008009	Aspergillus clavatus	29.90	4.00e-105	376.00
IUUC-Afl-008681	Aspergillus flavus	28.92	4.00e-95	342.00
IUUC-Afu-008798	Aspergillus fumigatus	29.36	3.00e-93	336.00
IUUC-Ani-009278	Aspergillus nidulans	28.14	5.00e-98	352.00
IUUC-Ang-009640	Aspergillus niger	29.59	2.00e-101	363.00
IUUC-Aor-010160	Aspergillus oryzae	28.92	6.00e-95	342.00
IUUC-Ate-010320	Aspergillus terreus	29.36	3.00e-105	376.00
IUUC-Ame-010930	Astyanax mexicanus	60.20	1.00e-74	271.00
IUUC-Bgr-012054	Blumeria graminis	28.60	7.00e-104	371.00
IUUC-Bta-012611	Bos taurus	89.86	0.00e+00	1395.00
IUUC-Bci-013797	Botrytis cinerea	30.96	4.00e-113	402.00
IUUC-Bdi-014384	Brachypodium distachyon	37.94	2.00e-162	566.00
IUUC-Bol-015097	Brassica oleracea	35.50	6.00e-146	511.00
IUUC-Bra-017798	Brassica rapa	35.74	3.00e-147	516.00
IUUC-Cel-018664	Caenorhabditis elegans	31.01	2.00e-118	419.00
IUUC-Cja-019092	Callithrix jacchus	93.80	0.00e+00	1511.00
IUUC-Cfa-021040	Canis familiaris	88.82	0.00e+00	1394.00
IUUC-Cpo-022529	Cavia porcellus	89.72	0.00e+00	1404.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	59.54	2.00e-46	177.00
IUUC-Csa-024205	Chlorocebus sabaeus	95.67	0.00e+00	1546.00
IUUC-Cin-025560	Ciona intestinalis	45.39	0.00e+00	719.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	31.18	3.00e-117	416.00
IUUC-Cne-027082	Cryptococcus neoformans	30.51	1.00e-114	407.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.65	9.00e-31	129.00
IUUC-Dre-028138	Danio rerio	52.88	0.00e+00	881.00
IUUC-Dno-029914	Dasypus novemcinctus	65.51	0.00e+00	806.00
IUUC-Dor-030685	Dipodomys ordii	76.92	0.00e+00	915.00
IUUC-Dse-031429	Dothistroma septosporum	29.75	9.00e-102	364.00
IUUC-Dme-031995	Drosophila melanogaster	32.22	3.00e-119	422.00
IUUC-Ete-033086	Echinops telfairi	90.44	0.00e+00	800.00
IUUC-Eca-034354	Equus caballus	91.28	0.00e+00	1399.00
IUUC-Eeu-034832	Erinaceus europaeus	86.63	0.00e+00	823.00
IUUC-Fca-036136	Felis catus	84.32	0.00e+00	1328.00
IUUC-Fal-036859	Ficedula albicollis	65.40	0.00e+00	1043.00
IUUC-Fox-037863	Fusarium oxysporum	30.53	2.00e-102	366.00
IUUC-Fso-038389	Fusarium solani	30.71	7.00e-114	405.00
IUUC-Gmo-038711	Gadus morhua	58.18	0.00e+00	909.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.76	6.00e-102	365.00
IUUC-Gga-040263	Gallus gallus	64.92	0.00e+00	1077.00
IUUC-Gac-041291	Gasterosteus aculeatus	60.44	0.00e+00	1021.00
IUUC-Gma-044026	Glycine max	39.27	3.00e-168	585.00
IUUC-Ggo-044693	Gorilla gorilla	98.39	0.00e+00	1551.00
IUUC-Hsa-046048	Homo sapiens	98.51	0.00e+00	1550.00
IUUC-Hvu-047608	Hordeum vulgare	37.24	1.00e-160	560.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	90.09	0.00e+00	1469.00
IUUC-Kpa-049209	Komagataella pastoris	32.91	4.00e-120	425.00
IUUC-Lch-050085	Latimeria chalumnae	62.05	0.00e+00	989.00
IUUC-Lpe-050945	Leersia perrieri	38.10	1.00e-158	553.00
IUUC-Loc-052679	Lepisosteus oculatus	64.86	0.00e+00	1084.00
IUUC-Laf-053685	Loxodonta africana	87.45	0.00e+00	1330.00
IUUC-Mcc-055861	Macaca mulatta	95.79	0.00e+00	1513.00
IUUC-Meu-056820	Macropus eugenii	70.11	0.00e+00	950.00
IUUC-Mor-057234	Magnaporthe oryzae	28.36	6.00e-102	365.00
IUUC-Mpo-057456	Magnaporthe poae	30.20	8.00e-83	301.00
IUUC-Mtr-058122	Medicago truncatula	39.15	1.00e-167	583.00
IUUC-Mla-058980	Melampsora laricipopulina	28.44	1.00e-97	351.00
IUUC-Mga-060080	Meleagris gallopavo	63.16	0.00e+00	1069.00
IUUC-Mvi-060338	Microbotryum violaceum	34.99	2.00e-141	496.00
IUUC-Mmr-060762	Microcebus murinus	92.07	0.00e+00	1446.00
IUUC-Mdo-061975	Monodelphis domestica	73.53	0.00e+00	1147.00
IUUC-Mmu-064038	Mus musculus	89.49	0.00e+00	1407.00
IUUC-Mac-065189	Musa acuminata	36.15	4.00e-160	558.00
IUUC-Mpu-066526	Mustela putorius furo	89.10	0.00e+00	1388.00
IUUC-Mlu-067716	Myotis lucifugus	89.56	0.00e+00	1469.00
IUUC-Nfi-068474	Neosartorya fischeri	29.81	3.00e-96	346.00
IUUC-Ncr-068826	Neurospora crassa	28.52	2.00e-97	350.00
IUUC-Nle-069832	Nomascus leucogenys	96.41	0.00e+00	1556.00
IUUC-Opr-071183	Ochotona princeps	82.87	0.00e+00	1301.00
IUUC-Ont-072371	Oreochromis niloticus	61.48	0.00e+00	1022.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.91	0.00e+00	927.00
IUUC-Oba-075963	Oryza barthii	37.48	2.00e-160	560.00
IUUC-Obr-076173	Oryza brachyantha	38.62	7.00e-161	561.00
IUUC-Ogl-077692	Oryza glaberrima	37.48	2.00e-160	559.00
IUUC-Ogu-078965	Oryza glumaepatula	37.48	2.00e-160	560.00
IUUC-Oin-079708	Oryza indica	37.48	1.00e-160	560.00
IUUC-Olo-080679	Oryza longistaminata	37.17	9.00e-158	550.00
IUUC-Oni-082960	Oryza nivara	37.36	3.00e-160	558.00
IUUC-Opu-083282	Oryza punctata	37.30	4.00e-153	535.00
IUUC-Oru-085224	Oryza rufipogon	37.48	2.00e-160	559.00
IUUC-Osa-085320	Oryza sativa	37.48	2.00e-160	559.00
IUUC-Ola-086370	Oryzias latipes	58.22	9.00e-132	464.00
IUUC-Olu-087814	Ostreococcus lucimarinus	33.33	5.00e-100	359.00
IUUC-Oga-088458	Otolemur garnettii	88.28	0.00e+00	1477.00
IUUC-Oar-090032	Ovis aries	80.53	0.00e+00	979.00
IUUC-Pan-091691	Papio anubis	92.20	0.00e+00	1444.00
IUUC-Psi-093200	Pelodiscus sinensis	64.70	0.00e+00	1058.00
IUUC-Pma-094165	Petromyzon marinus	52.84	0.00e+00	647.00
IUUC-Pno-095048	Phaeosphaeria nodorum	32.22	3.00e-91	329.00
IUUC-Ppa-095336	Physcomitrella patens	38.96	2.00e-159	556.00
IUUC-Pfo-096132	Poecilia formosa	61.62	0.00e+00	990.00
IUUC-Pab-097855	Pongo abelii	96.53	0.00e+00	1553.00
IUUC-Pop-099434	Populus trichocarpa	36.07	3.00e-151	529.00
IUUC-Pca-100232	Procavia capensis	84.50	2.00e-163	569.00
IUUC-Ppe-101665	Prunus persica	36.32	2.00e-158	553.00
IUUC-Pva-102178	Pteropus vampyrus	89.38	0.00e+00	1412.00
IUUC-Pgr-103288	Puccinia graminis	29.43	8.00e-85	308.00
IUUC-Ptt-103808	Puccinia triticina	31.87	6.00e-86	311.00
IUUC-Pte-104205	Pyrenophora teres	30.82	7.00e-107	381.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.70	3.00e-97	349.00
IUUC-Rno-105617	Rattus norvegicus	88.97	0.00e+00	1395.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.05	4.00e-109	389.00
IUUC-Sha-107378	Sarcophilus harrisii	73.45	0.00e+00	1136.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.22	7.00e-123	434.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.50	2.00e-119	423.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.97	4.00e-116	412.00
IUUC-Smo-109257	Selaginella moellendorffii	39.32	1.00e-158	553.00
IUUC-Sit-110258	Setaria italica	36.57	3.00e-162	565.00
IUUC-Sly-111521	Solanum lycopersicum	35.90	5.00e-155	541.00
IUUC-Stu-112718	Solanum tuberosum	45.71	7.00e-34	135.00
IUUC-Sar-113586	Sorex araneus	73.45	3.00e-61	229.00
IUUC-Sbi-114768	Sorghum bicolor	38.05	2.00e-165	576.00
IUUC-Sre-115159	Sporisorium reilianum	33.70	2.00e-97	350.00
IUUC-Ssc-116342	Sus scrofa	67.47	0.00e+00	917.00
IUUC-Tgu-117320	Taeniopygia guttata	64.32	0.00e+00	1010.00
IUUC-Tru-118024	Takifugu rubripes	60.55	0.00e+00	976.00
IUUC-Tni-119971	Tetraodon nigroviridis	60.66	0.00e+00	989.00
IUUC-Tca-121248	Theobroma cacao	37.09	9.00e-158	550.00
IUUC-Tre-122079	Trichoderma reesei	30.91	5.00e-106	378.00
IUUC-Tvi-122554	Trichoderma virens	30.17	3.00e-105	376.00
IUUC-Tae-123552	Triticum aestivum	37.93	2.00e-163	569.00
IUUC-Tur-126436	Triticum urartu	36.68	4.00e-132	465.00
IUUC-Tme-126942	Tuber melanosporum	31.81	1.00e-113	404.00
IUUC-Tbe-128000	Tupaia belangeri	91.30	3.00e-86	313.00
IUUC-Ttr-128964	Tursiops truncatus	87.82	0.00e+00	1400.00
IUUC-Uma-129473	Ustilago maydis	32.49	1.00e-105	378.00
IUUC-Vda-129749	Verticillium dahliae	30.54	3.00e-99	356.00
IUUC-Vvi-131511	Vitis vinifera	39.13	6.00e-161	561.00
IUUC-Xtr-132816	Xenopus tropicalis	55.11	0.00e+00	885.00
IUUC-Xma-133672	Xiphophorus maculatus	62.00	0.00e+00	1025.00
IUUC-Yli-134602	Yarrowia lipolytica	34.90	1.00e-138	486.00
IUUC-Zma-135559	Zea mays	36.61	9.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence