iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007488

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

U-box domain-containing protein 48; Plant U-box protein 48; RING-type E3 ubiquitin transferase PUB48

Genbank Nucleotide ID

AC051626

Gene Name

PUB48; At5g18340; F20L16.60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G18340	AT5G18340.1	AT5G18340.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-21	77.3	73	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           evp+ef+C++s+++M dPv++ sG+ty++++I +wl+++ + cP+ +q l    l+Pn+ + +li +wc +n+
   Q: 73   EVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHDLT-CPTAKQVLYRVCLTPNHLINELITRWCLANK 144
           69*************************************98.***************************9986 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MADSTADATE TNADTLTLRR ELKKVLTENL NDGGVKDRVE TVKSIDEAIR ILNRLKIVES 60
KKRKRESDSS SVEVPKEFKC TLSKTIMIDP VIIFSGQTYE KRYITEWLNH DLTCPTAKQV 120

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Nucleotide Sequence
(Fasta)

CAGAAATAAA AAGAAGCAGA GGAAGAAGAA TAACTGATTT ACATAACAGT TATTTCTTGG 60
CTTCTCTGAT TCTCGAAGTT TCTAGTGTTC TTTGCTTTTA TTTCTCTACG TTTATCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT5G18340

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence