iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	32.98	7.00e-42	170.00	IUUC-Hsa-045814

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MELGKKLREV GWYLTEEGLK IVTTAVGSED VRKIVNDALN RDLRDIGGGA LPAKREDATL 60
PGKIVLQVQR VRNIAAPKAN EESKAAPRLL QLDLSDGQNS IKALELEPVP QLNLNVAPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAATACTTT TGTCATCCCT AGTCCGGAGT TGCAAAAAAA TCGTCTTCAT GAAAAAATGG 60
AATTAGGCAA GAAACTACGA GAAGTCGGGT GGTAAGTACA ATTTTAAATT GTGGCATACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0046331--P:lateral inhibition
GO:0006397--P:mRNA processing

KEGG

dme:Dmel_CG13472

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	30.95	2.00e-14	72.40
IUUC-Aml-001751	Ailuropoda melanoleuca	39.37	6.00e-39	155.00
IUUC-Atr-002788	Amborella trichopoda	26.34	5.00e-14	71.60
IUUC-Apl-004055	Anas platyrhynchos	42.11	1.00e-33	137.00
IUUC-Aca-004367	Anolis carolinensis	33.69	1.00e-43	170.00
IUUC-Aly-006072	Arabidopsis lyrata	31.35	8.00e-18	84.00
IUUC-Ath-007491	Arabidopsis thaliana	32.09	1.00e-18	86.70
IUUC-Acl-008207	Aspergillus clavatus	36.54	2.90e-01	28.10
IUUC-Ame-011439	Astyanax mexicanus	39.63	3.00e-38	152.00
IUUC-Bta-012894	Bos taurus	37.44	1.00e-36	147.00
IUUC-Bdi-014462	Brachypodium distachyon	29.13	4.00e-17	81.60
IUUC-Bol-015343	Brassica oleracea	34.03	2.00e-19	89.40
IUUC-Bra-016787	Brassica rapa	36.60	3.00e-19	89.00
IUUC-Cel-018154	Caenorhabditis elegans	31.22	2.00e-25	109.00
IUUC-Cja-019364	Callithrix jacchus	35.92	4.00e-19	89.00
IUUC-Cfa-021166	Canis familiaris	38.91	6.00e-38	151.00
IUUC-Cpo-021678	Cavia porcellus	37.37	2.00e-15	77.00
IUUC-Csa-023299	Chlorocebus sabaeus	34.13	3.00e-43	169.00
IUUC-Cho-024694	Choloepus hoffmanni	35.92	2.00e-18	86.70
IUUC-Cin-025191	Ciona intestinalis	37.39	7.00e-28	116.00
IUUC-Csv-026348	Ciona savignyi	50.00	5.00e-10	55.10
IUUC-Dre-028715	Danio rerio	38.40	1.00e-38	153.00
IUUC-Dno-030091	Dasypus novemcinctus	40.27	2.00e-39	156.00
IUUC-Dor-030807	Dipodomys ordii	48.21	6.00e-11	62.00
IUUC-Ete-032507	Echinops telfairi	52.94	7.80e-02	31.20
IUUC-Eca-033406	Equus caballus	35.92	5.00e-19	88.60
IUUC-Eeu-034600	Erinaceus europaeus	38.27	2.00e-12	66.60
IUUC-Fca-035916	Felis catus	38.46	2.00e-38	153.00
IUUC-Fal-036658	Ficedula albicollis	38.33	6.00e-38	151.00
IUUC-Gmo-038974	Gadus morhua	39.01	5.00e-36	145.00
IUUC-Gga-040195	Gallus gallus	32.80	9.00e-44	171.00
IUUC-Gac-042537	Gasterosteus aculeatus	30.91	6.00e-40	158.00
IUUC-Gma-044234	Glycine max	31.28	2.00e-17	82.80
IUUC-Ggo-044715	Gorilla gorilla	29.31	1.00e-19	90.90
IUUC-Hsa-045814	Homo sapiens	33.07	1.00e-43	170.00
IUUC-Hvu-047365	Hordeum vulgare	30.59	2.00e-14	73.20
IUUC-Itr-047866	Ictidomys tridecemlineatus	40.27	4.00e-40	158.00
IUUC-Lch-050393	Latimeria chalumnae	31.78	3.00e-43	169.00
IUUC-Lpe-050691	Leersia perrieri	31.45	6.00e-17	81.30
IUUC-Loc-052859	Lepisosteus oculatus	37.07	1.00e-37	150.00
IUUC-Laf-053953	Loxodonta africana	50.00	1.00e-11	63.50
IUUC-Mcc-055846	Macaca mulatta	33.60	1.00e-40	160.00
IUUC-Meu-056790	Macropus eugenii	35.21	8.00e-19	88.20
IUUC-Mtr-058749	Medicago truncatula	32.99	1.00e-16	80.50
IUUC-Mla-058959	Melampsora laricipopulina	34.78	4.60e-02	31.20
IUUC-Mga-059656	Meleagris gallopavo	38.26	4.00e-40	159.00
IUUC-Mmr-061089	Microcebus murinus	39.83	9.00e-42	164.00
IUUC-Mdo-063043	Monodelphis domestica	35.21	6.00e-18	85.10
IUUC-Mmu-063654	Mus musculus	39.57	2.00e-43	170.00
IUUC-Mac-064947	Musa acuminata	30.00	1.00e-15	76.30
IUUC-Mpu-066115	Mustela putorius furo	35.92	3.00e-19	89.40
IUUC-Mlu-066974	Myotis lucifugus	41.42	2.00e-31	130.00
IUUC-Nle-069184	Nomascus leucogenys	33.07	2.00e-43	169.00
IUUC-Opr-070770	Ochotona princeps	50.00	1.00e-11	64.30
IUUC-Ont-072040	Oreochromis niloticus	30.91	1.00e-39	157.00
IUUC-Oan-073448	Ornithorhynchus anatinus	61.11	1.70e+00	25.00
IUUC-Ocu-074405	Oryctolagus cuniculus	40.00	1.00e-41	164.00
IUUC-Oba-075977	Oryza barthii	29.74	5.00e-09	54.70
IUUC-Obr-076298	Oryza brachyantha	29.59	1.00e-16	80.10
IUUC-Ogl-077706	Oryza glaberrima	29.74	2.00e-09	55.80
IUUC-Ogu-078381	Oryza glumaepatula	30.26	2.00e-09	56.20
IUUC-Oin-080150	Oryza indica	29.95	1.00e-09	57.00
IUUC-Ome-081153	Oryza meridionalis	29.59	1.00e-08	53.50
IUUC-Oni-083115	Oryza nivara	32.08	2.00e-09	55.50
IUUC-Opu-083860	Oryza punctata	30.11	8.00e-17	80.90
IUUC-Oru-084859	Oryza rufipogon	29.74	6.00e-10	57.80
IUUC-Osa-085567	Oryza sativa	31.36	2.00e-09	56.60
IUUC-Ola-087049	Oryzias latipes	31.79	2.00e-40	160.00
IUUC-Oga-088455	Otolemur garnettii	39.57	8.00e-41	161.00
IUUC-Oar-090096	Ovis aries	39.82	1.00e-38	154.00
IUUC-Ptr-090974	Pan troglodytes	30.34	2.00e-21	97.10
IUUC-Pan-092657	Papio anubis	34.40	2.00e-43	169.00
IUUC-Psi-093113	Pelodiscus sinensis	30.00	3.00e-21	96.30
IUUC-Ppa-095466	Physcomitrella patens	31.36	4.00e-14	71.60
IUUC-Pfo-096631	Poecilia formosa	31.88	2.00e-42	166.00
IUUC-Pab-098070	Pongo abelii	33.87	3.00e-42	166.00
IUUC-Pop-099235	Populus trichocarpa	30.73	8.00e-16	77.80
IUUC-Pca-101032	Procavia capensis	30.43	8.00e-19	87.80
IUUC-Ppe-101793	Prunus persica	29.32	4.00e-17	81.60
IUUC-Pva-102290	Pteropus vampyrus	35.21	2.00e-19	89.70
IUUC-Rno-105080	Rattus norvegicus	33.10	3.00e-19	89.40
IUUC-Sha-107598	Sarcophilus harrisii	31.86	1.00e-26	114.00
IUUC-Sit-110735	Setaria italica	28.64	8.00e-17	80.50
IUUC-Sly-111126	Solanum lycopersicum	35.06	3.00e-16	79.00
IUUC-Stu-112780	Solanum tuberosum	32.63	6.00e-20	90.90
IUUC-Sar-113418	Sorex araneus	33.80	1.00e-18	87.00
IUUC-Sbi-113925	Sorghum bicolor	28.64	2.00e-15	75.90
IUUC-Ssc-115712	Sus scrofa	40.09	2.00e-41	163.00
IUUC-Tgu-117148	Taeniopygia guttata	34.13	7.00e-43	168.00
IUUC-Tru-117831	Takifugu rubripes	30.85	3.00e-38	152.00
IUUC-Tsy-118917	Tarsius syrichta	34.78	3.00e-15	76.30
IUUC-Tni-120783	Tetraodon nigroviridis	31.03	2.00e-41	163.00
IUUC-Tca-121430	Theobroma cacao	35.19	5.00e-06	45.10
IUUC-Tae-123752	Triticum aestivum	30.95	9.00e-15	73.60
IUUC-Tur-126238	Triticum urartu	30.99	3.00e-14	72.00
IUUC-Ttr-128615	Tursiops truncatus	48.21	1.00e-11	63.90
IUUC-Vpa-130531	Vicugna pacos	34.51	3.00e-19	89.70
IUUC-Vvi-131607	Vitis vinifera	31.05	3.00e-13	68.90
IUUC-Xtr-132787	Xenopus tropicalis	32.28	2.00e-37	150.00
IUUC-Xma-133815	Xiphophorus maculatus	30.26	5.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence