iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043552

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100813831; GLYMA_13G115900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G17620	GLYMA13G17620.1	GLYMA13G17620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-08	35.9	84	131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +  +d+++ +++C Hvfh++C+++w + +  ++   +CPlCr
   Q: 84   CAVCLSQLsvEDEVReLMNCYHVFHRECIERW-LEHEHENHIPTCPLCR 131
           ******9988666875788*************.7777899999*****8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGFYAEDTLS GLTIGQAIYE VALMIAVLRW VLCLIFRVMN DRRRTESDET PAAEACCQKE 60
YNNTLVLTTF GEIKERLPQT EETCAVCLSQ LSVEDEVREL MNCYHVFHRE CIERWLEHEH 120

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Nucleotide Sequence
(Fasta)

ATGGGATTCT ACGCTGAAGA CACTCTCTCA GGCTTGACAA TAGGCCAGGC CATATACGAG 60
GTAGCTCTGA TGATTGCGGT TCTGAGATGG GTCTTGTGCT TGATCTTCAG AGTGATGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006546	Arabidopsis lyrata	45.98	2.00e-29	121.00
IUUC-Ath-007229	Arabidopsis thaliana	45.86	1.00e-31	129.00
IUUC-Bol-016201	Brassica oleracea	48.04	4.00e-35	140.00
IUUC-Bra-017937	Brassica rapa	47.49	3.00e-35	140.00
IUUC-Tca-121834	Theobroma cacao	46.52	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence