iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098796

UUCD1 version

UUC-PoT-00939

Ensembl Protein ID

POPTR_0006s23360.1

UniProt Accession

A9PBT4; A9PBT4_POPTR

Genbank Protein ID

ABK93837.1; EEE92970.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

EF145699; CM000342

Gene Name

POPTRDRAFT_717610; POPTR_0006s23360g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s23360	POPTR_0006s23360.1	POPTR_0006s23360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.40e-08	33.6	85	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkw.pglknssskefrCPlCr 46
           Ca+Cl+ +  +d+++ l+ C Hvfh+dC+ +w  + +    ++ +CPlCr
   Q: 85   CAVCLSQLrdQDEVRELRnCCHVFHRDCIDRWvDHDHEHDENHNTCPLCR 134
           ******9977555998888*************966666799999*****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGFFVEESGL IVTHLLYKAA LVLAVLRWAL AWALRFKNRT HLASPSNDSL RRSHPVPSSQ 60
QIRDGLILTT FGDVTERMPG VCDTCAVCLS QLRDQDEVRE LRNCCHVFHR DCIDRWVDHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCTTTCT CTCTTCTTCT TCCTCCTCCT CTTCCCCTCT CTGCTTTTTA CTTGTTTTCG 60
TTCTCTCCTC TAGGGTTCTT CGTTTTCAGA TTCGTTGCTT AGCTACTGCT CTCTATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s23360g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002811	Amborella trichopoda	39.89	1.00e-31	128.00
IUUC-Aly-006546	Arabidopsis lyrata	53.53	2.00e-33	134.00
IUUC-Ath-007229	Arabidopsis thaliana	55.06	9.00e-42	162.00
IUUC-Bol-016201	Brassica oleracea	52.84	5.00e-43	166.00
IUUC-Bra-016827	Brassica rapa	51.96	4.00e-45	172.00
IUUC-Gma-043735	Glycine max	51.41	3.00e-43	166.00
IUUC-Mtr-058513	Medicago truncatula	43.26	3.00e-39	153.00
IUUC-Mac-065487	Musa acuminata	60.42	1.00e-11	62.00
IUUC-Ppe-101734	Prunus persica	49.22	4.00e-41	160.00
IUUC-Tca-121834	Theobroma cacao	61.11	6.00e-53	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence