iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002870

Ensembl Protein ID

ERM97289

UniProt Accession

W1NR29; W1NR29_AMBTC

Genbank Protein ID

ERM97289.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI396540

Gene Name

AMTR_s00119p00137710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00119p00137710	ERM97289	ERM97289

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-32	111.1	273	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           H ++++cla  d t++ sGs+D t++vWD +t+++ 
   Q: 273  HGGPISCLAM-DlTRIYSGSWDMTVRVWDRSTFKCS 307
           99********.89****************9999886 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAYECHGSLD QNLYFSEDNN WNEERSTTCD TPHIPFCLSN ISTRKENPNS SPLSTSQSHQ 60
PKREISIKKP FKDSASLCPT SITSLRSITD LPPALISEIL HHLDPRELGI VSCVSTLFRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATATG AATGCCATGG GTCACTGGAC CAAAACTTAT ATTTTTCAGA GGATAACAAC 60
TGGAATGAAG AAAGGTCCAC AACCTGTGAC ACGCCTCACA TCCCCTTTTG TCTCTCTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0016036--P:cellular response to phosphate starvation

KEGG

atr:18425244

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	48.03	5.00e-143	500.00
IUUC-Aly-005424	Arabidopsis lyrata	52.40	8.00e-145	505.00
IUUC-Ath-007005	Arabidopsis thaliana	51.50	8.00e-147	512.00
IUUC-Bdi-014622	Brachypodium distachyon	45.31	7.00e-143	499.00
IUUC-Bol-016449	Brassica oleracea	53.36	2.00e-146	511.00
IUUC-Bra-017684	Brassica rapa	50.56	7.00e-101	359.00
IUUC-Gma-044132	Glycine max	52.66	4.00e-148	516.00
IUUC-Hvu-047789	Hordeum vulgare	48.03	3.00e-142	497.00
IUUC-Lpe-051245	Leersia perrieri	48.99	6.00e-134	469.00
IUUC-Mtr-058000	Medicago truncatula	51.40	2.00e-145	508.00
IUUC-Mac-065354	Musa acuminata	50.09	2.00e-143	501.00
IUUC-Oba-074979	Oryza barthii	49.90	3.00e-137	481.00
IUUC-Obr-076615	Oryza brachyantha	49.80	4.00e-139	486.00
IUUC-Ogl-077075	Oryza glaberrima	49.90	1.00e-137	482.00
IUUC-Ogu-078476	Oryza glumaepatula	49.90	5.00e-138	483.00
IUUC-Oin-079267	Oryza indica	50.10	2.00e-138	484.00
IUUC-Olo-080272	Oryza longistaminata	49.90	1.00e-137	482.00
IUUC-Ome-081994	Oryza meridionalis	50.31	1.00e-138	486.00
IUUC-Oni-082607	Oryza nivara	50.10	2.00e-138	484.00
IUUC-Opu-083533	Oryza punctata	50.41	8.00e-140	489.00
IUUC-Oru-084485	Oryza rufipogon	50.10	4.00e-138	483.00
IUUC-Osa-085675	Oryza sativa	50.10	3.00e-138	484.00
IUUC-Ppa-095179	Physcomitrella patens	47.81	2.00e-111	395.00
IUUC-Pop-099631	Populus trichocarpa	50.00	1.00e-143	502.00
IUUC-Ppe-102090	Prunus persica	48.54	3.00e-154	537.00
IUUC-Smo-108901	Selaginella moellendorffii	44.55	4.00e-102	363.00
IUUC-Sit-110702	Setaria italica	49.32	2.00e-137	481.00
IUUC-Sly-110878	Solanum lycopersicum	52.16	8.00e-147	512.00
IUUC-Stu-112399	Solanum tuberosum	51.54	3.00e-142	497.00
IUUC-Sbi-114384	Sorghum bicolor	50.00	2.00e-135	474.00
IUUC-Tca-121388	Theobroma cacao	55.08	4.00e-157	546.00
IUUC-Tae-125186	Triticum aestivum	48.03	4.00e-143	500.00
IUUC-Tur-126520	Triticum urartu	47.55	8.00e-142	496.00
IUUC-Vvi-131268	Vitis vinifera	52.39	1.00e-151	528.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence