iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_039839	EOY32226	EOY32226
TCM_039839	EOY32229	EOY32229
TCM_039839	EOY32228	EOY32228
TCM_039839	EOY32225	EOY32225
TCM_039839	EOY32224	EOY32224

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-09	37.2	210	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWDlr 31
           gH++s++cl  f   s+  ll+sG+ Dg + +W+ +
   Q: 210  GHKGSISCLMtFmasSGeALLASGASDGLLILWSAD 245
           8*******9659**766789*************965 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLRLRAFRAT NEKIVKIAVH PTHPWLVTAD ASDHVSVWNW EHRQVIYELK AGGVDQRRLV 60
GAKLEKLAEG ESEPKGKPTE AIRGGSVKQV TFFDDDVRFW QLWRNRSAAA EAPTAVNHLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTACGGC TGAGGGCATT TCGAGCGACG AATGAGAAGA TAGTGAAGAT AGCGGTGCAT 60
CCGACGCATC CATGGTTGGT AACCGCCGAT GCCTCCGATC ATGTCTCCGT TTGGAACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	65.52	0.00e+00	1098.00
IUUC-Atr-002897	Amborella trichopoda	77.96	0.00e+00	1730.00
IUUC-Aly-006154	Arabidopsis lyrata	83.01	0.00e+00	1897.00
IUUC-Ath-007285	Arabidopsis thaliana	83.78	0.00e+00	1907.00
IUUC-Bdi-014824	Brachypodium distachyon	78.27	0.00e+00	1676.00
IUUC-Bol-016428	Brassica oleracea	81.76	0.00e+00	1833.00
IUUC-Bra-017475	Brassica rapa	81.76	0.00e+00	1844.00
IUUC-Gma-043699	Glycine max	83.93	0.00e+00	1862.00
IUUC-Hvu-047404	Hordeum vulgare	81.06	2.00e-137	480.00
IUUC-Mtr-058798	Medicago truncatula	83.57	0.00e+00	1894.00
IUUC-Mac-065076	Musa acuminata	80.56	0.00e+00	1878.00
IUUC-Oba-075727	Oryza barthii	76.17	0.00e+00	1679.00
IUUC-Obr-076460	Oryza brachyantha	79.30	0.00e+00	1750.00
IUUC-Ogl-077837	Oryza glaberrima	78.54	0.00e+00	1757.00
IUUC-Ogu-078912	Oryza glumaepatula	76.99	0.00e+00	1678.00
IUUC-Oin-079644	Oryza indica	79.46	0.00e+00	1752.00
IUUC-Olo-080463	Oryza longistaminata	77.41	0.00e+00	1442.00
IUUC-Ome-081748	Oryza meridionalis	76.99	0.00e+00	1673.00
IUUC-Oni-083096	Oryza nivara	76.99	0.00e+00	1675.00
IUUC-Opu-083280	Oryza punctata	79.46	0.00e+00	1772.00
IUUC-Oru-084728	Oryza rufipogon	76.99	0.00e+00	1674.00
IUUC-Osa-085295	Oryza sativa	79.46	0.00e+00	1752.00
IUUC-Ppa-095297	Physcomitrella patens	59.84	0.00e+00	1287.00
IUUC-Ppe-101567	Prunus persica	85.73	0.00e+00	1962.00
IUUC-Smo-109297	Selaginella moellendorffii	60.41	0.00e+00	1316.00
IUUC-Sit-109913	Setaria italica	77.63	0.00e+00	1749.00
IUUC-Sly-110980	Solanum lycopersicum	82.24	0.00e+00	1798.00
IUUC-Stu-112643	Solanum tuberosum	82.49	0.00e+00	1805.00
IUUC-Sbi-114411	Sorghum bicolor	78.83	0.00e+00	1405.00
IUUC-Tae-124034	Triticum aestivum	78.18	0.00e+00	1659.00
IUUC-Tur-126798	Triticum urartu	76.45	0.00e+00	826.00
IUUC-Vvi-131320	Vitis vinifera	88.46	0.00e+00	1307.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence