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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007041
Ensembl Protein ID AT5G27080.1
UniProt Accession Q9S7H3; F4K2T7; CD203_ARATH
Genbank Protein ID AAF14050.1; AAD48933.1; AED93647.2
Protein Name Cell division cycle 20.3, cofactor of APC complex
Genbank Nucleotide ID AF029264; AF160760; CP002688
Gene Name CDC20-3; CDC20_4; At5g27080; F15P11.5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G27080 AT5G27080.1 AT5G27080.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexHINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/APC_C/CDC20 6.30e-121 404.2 112 420
E3 adaptor/Cullin RING/DCX/DWD 1.20e-25 89.3 297 336
UBD/Beta-Prp 6.40e-43 147.9 162 415
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tghsa 97
    e+vldap l ddfylnLldW+s nvla+aLg +vylw+a++g+ s+l + e+k vts++w+++g lavG +++ev+++D ++++vrtl gh +
   Q: 112 ERVLDAPGLMDDFYLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIdEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLiGGHES 209
    79************************************************777889************************************999*** PP
   S: 98 rvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.......Plkkfkehkaavkaiaws 188
    rvg+L+Wn+++l++G+ dg+i+ +dvr++ + t+ +h++evCGlkw+e++k+LasGGn n+v++wd++s l++f+eh+aav+a+aw+
   Q: 210 RVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVAsskptrqWLHRFEEHTAAVRALAWC 307
    ********************************************************************99876667444446889************* PP
   S: 189 PwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaa 286
    P+q +lLa+GGG D +ikfwnt tga+l++++tgsqvcsllws++++el+s+hGf++n++tlwkyps+sk+ael+gh++Rvl +a sp+g ++++aa
   Q: 308 PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAA 405
    ************************************************************************************************** PP
   S: 287 gDetlrfwklfdkkk 301
    gDe+lr+w++f + +
   Q: 406 GDENLRLWNVFGEPP 420
    ***********8765 PP
   


   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGs..dDgtikvWDlrtgvll 36
    Ht+ v++la+ tll++G+ +Dg+ik W+++tg +l
   Q: 297 HTAAVRALAWcpFQaTLLATGGgvGDGKIKFWNTHTGACL 336
    9**********94469****9999*************997 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsf 102
    +++k+++t++ +++d+ la+g +++ +++wd+ + +r+l ghe+ v ++ ++++ il tg+ D+ i +d++ +++v t+ gh+++v+ l++
   Q: 162 DEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLiGGHESRVGSLAWNNH--ILTTGGMDGKIVNNDVRiRSSIVGTYLGHTEEVCGLKW 257
    56899*************************************9***************..***********999*9978899999************* PP
   S: 103 spsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdg.nllvsGs..lDrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
    s+sg+kl+sG++ +++++wd+++ ++ +++h+++v+ +++ p++ ll++G+ D+++++W+ tg +l + ++v sl +++
   Q: 258 SESGKKLASGGNYNVVHIWDHRSVASSKPtrqwlhRFEEHTAAVRALAWCPFQaTLLATGGgvGDGKIKFWNTHTGACLNSVET--GSQVCSLLWSQR 353
    *********************977666656666669*****************9*****86337******************75..9*********** PP
   S: 192 gkelvs..gsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
    +el+s g + ++++lw + + + + +lnght+ v+ ++ spn+ ++s++ D+ +r+W++
   Q: 354 ERELLSshGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
    *99999445689************************************************95 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
Protein Sequence
(Fasta)
MDSDTCTVPD HFLPRKLSKQ NLDRFIPNRS AMDFDFANYA LTQGRKRNVD EITSASRKAY 60
MTQLAVVMNQ NRTRILAFRN KPKALLSSNH SDSPHQNPKS VKPRRYIPQN SERVLDAPGL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007041|E3,CDC20;E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGATTCGG ATACGTGTAC AGTTCCAGAC CACTTTCTTC CGAGGAAACT TTCCAAGCAA 60
AACTTGGACA GATTCATCCC AAACAGATCC GCCATGGATT TCGATTTTGC TAACTACGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007041|E3,CDC20;E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0498--Mitosis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0097027--F:ubiquitin-protein transferase activator activity
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:1904668--P:positive regulation of ubiquitin protein ligase activity
GO:0016567--P:protein ubiquitination

KEGG ath:AT5G27080
Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

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