iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006979

UUCD1 version

UUC-ArT-00623

Ensembl Protein ID

AT5G27420.1

UniProt Accession

Q8LGA5; Q0WUY7; ATL31_ARATH

Genbank Protein ID

AED93685.1; BAE99061.1; AAM60957.1

Protein Name

E3 ubiquitin-protein ligase ATL31; Protein CARBON/NITROGEN INSENSITIVE 1; Protein SUPER SURVIVAL 1; RING-H2 finger protein ATL31; RING-type E3 ubiquitin transferase ATL31

Genbank Nucleotide ID

AC007123; AK226995; AY084377

Gene Name

ATL31; CNI1; SSV1; At5g27420; F21A20.130

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G27420	AT5G27420.1	AT5G27420.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	24739470

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	3.70e-09	37.8	124	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  ++ +++lp C Hvfh +C+ +w       +++ +CP+Cr
   Q: 124  CAICLNEFedDETLRLLPkCDHVFHPHCIGAW------LQGHVTCPVCR 166
           ********6544499999**************......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

E3 ubiquitin-protein ligase that is required for the plant C/N response during seedling growth transition. May be involved in the early steps of the plant defense signaling pathway.

Protein Sequence
(Fasta)

MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG 60
FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET IETFPTFVYS EVKTQKIGKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTAACTTC CTCGCTTCTT CTCCACGACT TTTTCAAACT TTTCAAAACC TCCCTATAAA 60
CTTCAGATCC TTATTCCTCA CAATATTAAA CCAAAAAAAA AAACTAACTT TTTGGGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0597--Phosphoprotein
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016020--C:membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043562--P:cellular response to nitrogen levels
GO:0009816--P:defense response to bacterium, incompatible interaction
GO:0009814--P:defense response, incompatible interaction
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid
GO:0010200--P:response to chitin

KEGG

ath:AT5G27420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006030	Arabidopsis lyrata	91.11	9.00e-176	608.00
IUUC-Bol-015945	Brassica oleracea	75.77	2.00e-139	487.00
IUUC-Bra-017899	Brassica rapa	75.49	1.00e-138	485.00
IUUC-Mac-064577	Musa acuminata	48.29	2.00e-54	205.00
IUUC-Pgr-103645	Puccinia graminis	44.74	1.00e-13	69.30
IUUC-Sly-111292	Solanum lycopersicum	42.90	9.00e-55	206.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence