iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121741

Ensembl Protein ID

EOY02338

UniProt Accession

A0A061EJ69; A0A061EJ69_THECC

Genbank Protein ID

EOY02338.1; EOY02339.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001882; CM001882

Gene Name

TCM_016848

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_016848	EOY02338	EOY02338
TCM_016848	EOY02340	EOY02340

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	31.9	172	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  kd +++lp C H+fh +C+  w         + +CPlCr
   Q: 172  CAVCLCEFseKDKLRLLPmCSHAFHINCIDTW------LLSNSTCPLCR 214
           ********88666*******************......888889****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVLECSYIIC GMLEIKEKSW VLEHNHLKMS WVHHNQIRQK DGYFQYPPPL PPSPYTAATT 60
FHKDSNPSPS STSSSSGTRI SPAVLFIIVI LAVLFFISGL LHLLVRFLIK HPSSSTSSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTTAGAA GGGGGAGGAG ACTCACTTTT GAGAGAGAGA GAGAGAACCC AAAAACCAAA 60
GTGCTTTTCG ACATTTGGTT TTTTTTTTTT TCTGATAAAT ACTTGGATTT AGATACCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000392	Aegilops tauschii	59.42	3.00e-61	227.00
IUUC-Atr-002701	Amborella trichopoda	46.60	4.00e-60	224.00
IUUC-Aly-005849	Arabidopsis lyrata	67.60	2.00e-118	417.00
IUUC-Ath-006995	Arabidopsis thaliana	66.92	2.00e-118	417.00
IUUC-Bol-015358	Brassica oleracea	64.97	4.00e-106	377.00
IUUC-Bra-017624	Brassica rapa	64.06	5.00e-102	363.00
IUUC-Gma-044353	Glycine max	70.30	3.00e-106	377.00
IUUC-Lpe-051278	Leersia perrieri	48.74	3.00e-68	251.00
IUUC-Mtr-058167	Medicago truncatula	66.58	2.00e-104	371.00
IUUC-Obr-076120	Oryza brachyantha	57.71	2.00e-72	265.00
IUUC-Oin-080065	Oryza indica	52.69	4.00e-67	247.00
IUUC-Pop-099808	Populus trichocarpa	74.15	4.00e-129	453.00
IUUC-Ppe-101995	Prunus persica	74.06	7.00e-113	399.00
IUUC-Sit-109828	Setaria italica	51.72	5.00e-69	253.00
IUUC-Sly-111152	Solanum lycopersicum	64.38	2.00e-101	361.00
IUUC-Stu-112833	Solanum tuberosum	64.81	5.00e-106	377.00
IUUC-Vvi-131093	Vitis vinifera	68.99	1.00e-108	385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence