iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_033800	EOY14410	EOY14410
TCM_033800	EOY14409	EOY14409
TCM_033800	EOY14408	EOY14408
TCM_033800	EOY14411	EOY14411

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-07	30.5	656	697

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ dg  + +l CgH fhadC+++w         + +CP+C+
   Q: 656  CCICQEEYNDGqdLGTLECGHDFHADCIKQW------LIHKNLCPICK 697
           ********6654488899*************......999999****6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MQGQRGTVGS LPETFFDHGS TSSNATIDQQ VCWNNIRNPM ENRLPDCLLS PNDMNIAYVN 60
SIGREEQELG RWSLGEPSSS GTQNEVIRNE RKIEHGWSSS MSASGNAGPR LEERRYEQNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCATTGGGA GACGGGTCCT AATTAATATT TATTTATTTT ATACGTTTAG TTGTAGAGAT 60
AGGGAGGGGA AAAATCTTTA CAAGGAAAAG AAAGATGGAG ACTTGAAAGC CATTTGGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005474	Arabidopsis lyrata	43.39	1.00e-115	409.00
IUUC-Ath-006794	Arabidopsis thaliana	42.56	5.00e-108	384.00
IUUC-Bdi-014368	Brachypodium distachyon	34.19	5.00e-70	258.00
IUUC-Bol-015553	Brassica oleracea	39.06	8.00e-95	340.00
IUUC-Bra-017121	Brassica rapa	38.45	4.00e-88	318.00
IUUC-Gma-042748	Glycine max	56.33	0.00e+00	630.00
IUUC-Hvu-047680	Hordeum vulgare	35.19	3.00e-78	285.00
IUUC-Mtr-057649	Medicago truncatula	53.13	2.00e-159	555.00
IUUC-Mac-065366	Musa acuminata	36.97	1.00e-82	300.00
IUUC-Oba-075898	Oryza barthii	46.64	7.00e-52	197.00
IUUC-Ogl-077587	Oryza glaberrima	46.64	8.00e-52	197.00
IUUC-Ogu-078729	Oryza glumaepatula	46.64	7.00e-52	197.00
IUUC-Oin-079127	Oryza indica	46.64	7.00e-52	197.00
IUUC-Olo-080490	Oryza longistaminata	46.64	7.00e-52	197.00
IUUC-Ome-081637	Oryza meridionalis	34.99	2.00e-70	259.00
IUUC-Oni-082106	Oryza nivara	46.64	7.00e-52	197.00
IUUC-Oru-085229	Oryza rufipogon	46.64	7.00e-52	197.00
IUUC-Osa-085404	Oryza sativa	46.64	7.00e-52	197.00
IUUC-Pop-099945	Populus trichocarpa	52.84	0.00e+00	649.00
IUUC-Ppe-101513	Prunus persica	61.73	0.00e+00	767.00
IUUC-Sit-110290	Setaria italica	53.68	7.00e-56	211.00
IUUC-Sly-111039	Solanum lycopersicum	47.28	5.00e-147	514.00
IUUC-Stu-112737	Solanum tuberosum	45.58	4.00e-124	437.00
IUUC-Sbi-113819	Sorghum bicolor	53.37	5.00e-54	205.00
IUUC-Vvi-131306	Vitis vinifera	60.76	0.00e+00	738.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence