iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002618

Ensembl Protein ID

ERN01438

UniProt Accession

W1P0H3; W1P0H3_AMBTC

Genbank Protein ID

ERN01438.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

KI394767

Gene Name

AMTR_s00002p00266860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00002p00266860	ERN01438	ERN01438

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-17	64.3	103	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt...........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
            vkvs++g+++++++dl+ + +++dLlka++  +            + k+se+ ++YeD+dGD++ l++D+++++++       s++rl+i+k
   Q: 103  YVKVSMDGAPYLRKIDLKNYKGYQDLLKALENmFScftigdfakkeGSKTSEYVPTYEDKDGDWM-LVGDVPWEMFIF------SCKRLRIMK 188
           59******************************722566999999989999***************.************......********8 PP

Organism

Amborella trichopoda

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEKARSYEKD LNFEETELRL GLPGCDDSSS LTQKGSKRVF SDTTDDVRSK PSPNCTAQIE 60
REGAPVAKAQ VVGWPPVRSS YRKNNLHVTN SMKKTEPEAP GFYVKVSMDG APYLRKIDLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAGG CAAGAAGTTA TGAGAAGGAC CTTAATTTTG AGGAAACTGA GCTCAGGCTG 60
GGCTTGCCGG GTTGCGATGA CTCGTCGAGT TTGACTCAGA AGGGAAGCAA GAGGGTGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

atr:18429520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	46.12	2.00e-39	153.00
IUUC-Aly-006269	Arabidopsis lyrata	56.28	1.00e-57	214.00
IUUC-Ath-007238	Arabidopsis thaliana	57.87	1.00e-56	210.00
IUUC-Ani-009172	Aspergillus nidulans	27.12	1.60e+00	25.80
IUUC-Bol-015312	Brassica oleracea	56.93	1.00e-56	211.00
IUUC-Bra-018063	Brassica rapa	55.94	2.00e-55	207.00
IUUC-Gma-043277	Glycine max	57.14	6.00e-58	215.00
IUUC-Hvu-047853	Hordeum vulgare	46.05	1.00e-36	145.00
IUUC-Mtr-058760	Medicago truncatula	56.63	8.00e-55	204.00
IUUC-Mac-064820	Musa acuminata	57.65	8.00e-59	218.00
IUUC-Oba-075141	Oryza barthii	50.72	3.00e-46	176.00
IUUC-Oru-084991	Oryza rufipogon	50.24	3.00e-42	163.00
IUUC-Pab-098295	Pongo abelii	55.56	1.10e+00	25.40
IUUC-Pop-100057	Populus trichocarpa	57.92	3.00e-57	213.00
IUUC-Ppe-101322	Prunus persica	58.71	7.00e-60	221.00
IUUC-Sly-110939	Solanum lycopersicum	60.31	2.00e-56	210.00
IUUC-Stu-112636	Solanum tuberosum	59.69	1.00e-54	204.00
IUUC-Tca-121122	Theobroma cacao	59.80	2.00e-62	229.00
IUUC-Vvi-131257	Vitis vinifera	57.73	2.00e-52	197.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence