iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110939

Ensembl Protein ID

Solyc09g083280.2.1

UniProt Accession

G9HPV2; G9HPV2_SOLLC

Genbank Protein ID

AEX00347.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379431

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g083280.2	Solyc09g083280.2.1	Solyc09g083280.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	7.60e-19	68.4	100	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + vkvs++g+++++++dl+ +  +++Llka++  ++          ++k+se+a+ YeD+dGDl+ l++D+++++++s      s++rl+i
   Q: 100  MYVKVSMDGAPYLRKIDLKMYKCYQELLKALENmFKltigeysereGYKGSEFAPAYEDKDGDLM-LVGDVPWEMFMS------SCKRLRI 183
           579******************************73366999999*9*******************.************......******* PP
   S: 82   qk 83
           +k
   Q: 184  MK 185
           *8 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSIVGNQKD LNFKATELRL GLPGTEDQES DQEISNSKNN NKRALPESTH DEEDCESKSS 60
SDHVKTPPPV AKAQIVGWPP VRSNRKNIIQ PKKTESESGM YVKVSMDGAP YLRKIDLKMY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACCAACAA CTTGCAAAGA CCTCACCTTT TTCTTGAAAT ACACAACTTC TTCTGAGATA 60
GTAAATAAAG GAGCAATCTT GATCAAGAAA GTGTTTAAAG AATTTCTGTG TGTGTGTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:101055541

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	47.06	7.00e-42	162.00
IUUC-Atr-002618	Amborella trichopoda	60.31	2.00e-57	214.00
IUUC-Aly-005805	Arabidopsis lyrata	65.45	2.00e-62	231.00
IUUC-Ath-007238	Arabidopsis thaliana	68.28	2.00e-67	247.00
IUUC-Bdi-014020	Brachypodium distachyon	46.83	1.00e-40	158.00
IUUC-Bol-015312	Brassica oleracea	70.37	8.00e-69	251.00
IUUC-Bra-018063	Brassica rapa	70.90	5.00e-69	252.00
IUUC-Cme-027333	Cyanidioschyzon merolae	33.33	5.10e-01	27.70
IUUC-Gma-043214	Glycine max	66.50	8.00e-71	258.00
IUUC-Hvu-047853	Hordeum vulgare	49.05	6.00e-42	162.00
IUUC-Meu-056851	Macropus eugenii	29.79	7.20e-01	27.30
IUUC-Mtr-058557	Medicago truncatula	65.26	9.00e-65	238.00
IUUC-Mac-064820	Musa acuminata	60.21	2.00e-58	217.00
IUUC-Obr-076144	Oryza brachyantha	49.76	3.00e-43	167.00
IUUC-Ogl-077720	Oryza glaberrima	46.02	1.00e-41	162.00
IUUC-Ogu-078093	Oryza glumaepatula	51.47	1.00e-44	171.00
IUUC-Opu-083449	Oryza punctata	45.66	5.00e-34	137.00
IUUC-Pop-098896	Populus trichocarpa	66.49	9.00e-67	245.00
IUUC-Ppe-101322	Prunus persica	70.47	5.00e-75	272.00
IUUC-Sit-109841	Setaria italica	49.76	2.00e-47	181.00
IUUC-Stu-112670	Solanum tuberosum	98.98	4.00e-105	372.00
IUUC-Sbi-114105	Sorghum bicolor	47.94	4.00e-43	166.00
IUUC-Tca-121147	Theobroma cacao	67.53	3.00e-70	256.00
IUUC-Vvi-131595	Vitis vinifera	66.33	1.00e-66	244.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence