iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aca-004560

Ensembl Protein ID

ENSACAP00000004315.3

UniProt Accession

H9G906; H9G906_ANOCA

Protein Name

Uncharacterized protein

Gene Name

CHD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000004276.3	ENSACAT00000004415.3	ENSACAP00000004315.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.20e-16	59.7	432	477

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  ++ p+ + w Cp C++
   Q: 432  DYCEVCQQGGE----IILCDSCPRAYHLVCLDPE-LDKAPEGK-WSCPHCEK 477
           79*********....9******************.*******7.******86 PP

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MSGRDIEDSY PQPAQLKKTG SATMASPLRE DDDEEEEMVV SEAEGDEDGD EEEEEEEEEE 60
AEAGEAAKRD NSHSSPGGAD IFPLAAPAEP PPDEEEKELR NPESPLVIKK KKRGPKKQKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGTCATGG AAACTTAGCA TGAGTGGAAG GGACATAGAG GATTCCTATC CTCAACCTGC 60
ACAACTGAAA AAGACTGGCA GGTAGGATAT TTTCTCACAG CAAAAAGGAA TAATTTAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028722--CHD3
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0051297--P:centrosome organization
GO:0006333--P:chromatin assembly or disassembly
GO:0006355--P:regulation of transcription, DNA-templated
GO:0007051--P:spindle organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007406	Arabidopsis thaliana	40.46	3.00e-157	550.00
IUUC-Ame-011352	Astyanax mexicanus	82.34	0.00e+00	2103.00
IUUC-Bta-012868	Bos taurus	82.49	0.00e+00	2784.00
IUUC-Bol-016073	Brassica oleracea	41.22	2.00e-157	551.00
IUUC-Bra-016724	Brassica rapa	41.69	4.00e-158	553.00
IUUC-Cja-019018	Callithrix jacchus	86.57	0.00e+00	2271.00
IUUC-Cfa-021055	Canis familiaris	81.73	0.00e+00	2759.00
IUUC-Cpo-021523	Cavia porcellus	84.20	0.00e+00	2818.00
IUUC-Csa-024136	Chlorocebus sabaeus	83.02	0.00e+00	2737.00
IUUC-Dor-030167	Dipodomys ordii	86.12	0.00e+00	2292.00
IUUC-Ete-032757	Echinops telfairi	77.44	0.00e+00	2499.00
IUUC-Eeu-034777	Erinaceus europaeus	77.17	0.00e+00	2283.00
IUUC-Fca-036043	Felis catus	83.01	0.00e+00	2765.00
IUUC-Gmo-038957	Gadus morhua	79.37	0.00e+00	1459.00
IUUC-Gac-041375	Gasterosteus aculeatus	71.59	0.00e+00	2591.00
IUUC-Gma-043999	Glycine max	42.94	0.00e+00	732.00
IUUC-Ggo-045538	Gorilla gorilla	82.64	0.00e+00	2746.00
IUUC-Hsa-045916	Homo sapiens	82.69	0.00e+00	2743.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	83.18	0.00e+00	2738.00
IUUC-Lch-050343	Latimeria chalumnae	79.91	0.00e+00	2076.00
IUUC-Loc-052383	Lepisosteus oculatus	80.50	0.00e+00	2078.00
IUUC-Laf-053870	Loxodonta africana	86.99	0.00e+00	2536.00
IUUC-Mcc-055499	Macaca mulatta	77.55	0.00e+00	2598.00
IUUC-Meu-056292	Macropus eugenii	73.57	0.00e+00	1082.00
IUUC-Mmr-061223	Microcebus murinus	81.54	0.00e+00	2741.00
IUUC-Mdo-062971	Monodelphis domestica	81.97	0.00e+00	2601.00
IUUC-Mmu-063920	Mus musculus	83.03	0.00e+00	2746.00
IUUC-Mpu-065809	Mustela putorius furo	85.21	0.00e+00	2572.00
IUUC-Mlu-067355	Myotis lucifugus	83.14	0.00e+00	2803.00
IUUC-Nle-069842	Nomascus leucogenys	82.98	0.00e+00	2679.00
IUUC-Opr-070960	Ochotona princeps	84.26	0.00e+00	2730.00
IUUC-Oan-072885	Ornithorhynchus anatinus	59.82	0.00e+00	1896.00
IUUC-Ocu-074438	Oryctolagus cuniculus	79.26	0.00e+00	2640.00
IUUC-Oga-088374	Otolemur garnettii	82.52	0.00e+00	2751.00
IUUC-Oar-089784	Ovis aries	80.95	0.00e+00	2753.00
IUUC-Ptr-090799	Pan troglodytes	82.74	0.00e+00	2749.00
IUUC-Ppa-095213	Physcomitrella patens	41.34	0.00e+00	711.00
IUUC-Pfo-096265	Poecilia formosa	74.69	0.00e+00	2500.00
IUUC-Pab-098174	Pongo abelii	81.01	0.00e+00	2599.00
IUUC-Pca-100829	Procavia capensis	85.17	0.00e+00	2091.00
IUUC-Rno-104884	Rattus norvegicus	84.12	0.00e+00	2659.00
IUUC-Sha-107233	Sarcophilus harrisii	82.17	0.00e+00	2702.00
IUUC-Ssc-115751	Sus scrofa	82.70	0.00e+00	2778.00
IUUC-Tru-118648	Takifugu rubripes	79.47	0.00e+00	2144.00
IUUC-Tni-120039	Tetraodon nigroviridis	78.01	0.00e+00	2115.00
IUUC-Tbe-128117	Tupaia belangeri	88.58	0.00e+00	1148.00
IUUC-Vpa-130209	Vicugna pacos	94.74	7.00e-176	612.00
IUUC-Vvi-130849	Vitis vinifera	43.32	0.00e+00	731.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence