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Tag Content
iUUCD ID IUUC-Aly-005752
Ensembl Protein ID fgenesh2_kg.8__883__AT5G50120.1
UniProt Accession D7MPJ0; D7MPJ0_ARALL
Genbank Protein ID EFH42033.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348720
Gene Name ARALYDRAFT_495067
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__883__AT5G50120.1 fgenesh2_kg.8__883__AT5G50120.1 fgenesh2_kg.8__883__AT5G50120.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.20e-37 124.7 164 201
UBD/Beta-Prp 7.70e-40 137.6 163 386
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H d v++la+ d tll s s+D t+k+W+++++++l
   Q: 164 HVDAVSGLALsRDgTLLYSVSWDRTLKIWRTSDFKCLE 201
    99*********888********************9986 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw..dls 82
    hh + ++ ++ s+d++ll + s+d+t+k+w++++ k+l+s+ h+++++av +s++g+ + tgs+D+ ikvw +++
   Q: 163 HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTSDFKCLESFtNAHDDAINAVALSENGD-IYTGSSDQRIKVWrkNIN 239
    888899999********************************99***************7.88***********88666 PP
   S: 83 ..........tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhp 147
    + + v +l++h++ + +l++s +g l sG++d i vw+ e+g + +l+gh+++v c++v +
   Q: 240 eenekkkkkkKHSLVAILSEHNSGINALALSGnNGTLLHSGGSDGSILVWEREEGGDIVLvgMLRGHTESVLCLAVVS 317
    888899998899999999**************5669999***************99887788**************** PP
   S: 148 dgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvysls.....fdsng......kelvsgsldgtvklwdl 209
    ++l sGs+D+tvrlW+ ++l l+g h ++v++l+ g ++ sg+ld++vk+w++
   Q: 318 --DILCSGSADKTVRLWKCsgTDYSCLAMLEG-HIGPVKCLTgairhS---GkpseasYHIYSGGLDSQVKVWQI 386
    ..9**************99767789*****99.**********96550...4455556***************87 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MIRFQESEEE PDFSQEDHLT SSCQPLHQCI ATLVCHTASY ISSLTLAGKR LYTGSNDGVV 60
RLWNANTLET LAEASSNGDV ITGERGGGGA VKSLVILADK LFTAHQDHKI RVWKINDVVE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-005752|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTTTCTCTT TATATTACCT CTCCAAGGTT TGCTCATTGG TTCAATCTTC CTTCATAAGA 60
AACAATGATA CGATTTCAAG AATCCGAAGA AGAGCCTGAT TTTTCTCAAG AAGATCATCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005752|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG aly:ARALYDRAFT_495067
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001063 Aegilops tauschii 36.28 2.00e-36 146.00
IUUC-Ath-006904 Arabidopsis thaliana 92.54 0.00e+00 693.00
IUUC-Bol-016325 Brassica oleracea 52.80 2.00e-87 315.00
IUUC-Bra-017764 Brassica rapa 80.36 7.00e-168 582.00
IUUC-Gma-043330 Glycine max 55.21 1.00e-113 402.00
IUUC-Lpe-050736 Leersia perrieri 43.77 1.00e-78 286.00
IUUC-Mtr-058728 Medicago truncatula 55.89 5.00e-113 400.00
IUUC-Mac-064538 Musa acuminata 46.34 2.00e-86 311.00
IUUC-Opu-083726 Oryza punctata 42.53 2.00e-72 265.00
IUUC-Pop-099892 Populus trichocarpa 60.34 2.00e-113 401.00
IUUC-Ppe-101853 Prunus persica 58.27 2.00e-112 398.00
IUUC-Sit-109950 Setaria italica 43.58 1.00e-64 239.00
IUUC-Sly-111471 Solanum lycopersicum 51.65 7.00e-107 380.00
IUUC-Stu-112792 Solanum tuberosum 51.52 8.00e-104 369.00
IUUC-Tca-121089 Theobroma cacao 58.88 2.00e-122 431.00
Created Date 25-Jun-2017

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