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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Cel-018131
UUCD1 version UUC-CaE-00364
Ensembl Protein ID F02E8.5
UniProt Accession Q19124; A16L1_CAEEL
Genbank Protein ID CCD83386.1
Protein Name Autophagic-related protein 16.1
Genbank Nucleotide ID FO081068
Gene Name atg-16.1; F02E8.5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00017178 F02E8.5 F02E8.5
Annotation
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.20e-28 98.2 376 413
UBD/Beta-Prp 2.50e-47 161.8 297 578
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
    gH+d vtc++f +++ vsGs D +ik+WD+ +++ +
   Q: 376 GHSDQVTCVKFyQSHSAVSGSADRVIKIWDIQNQRCSR 413
    8**********95589***************9999976 PP
   


   UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
    +v++ d++ +atg+ d+ ik+w+v+ + +l g +a+ t +++++d+k ++ +s+D+++++w+l+++ ++tl+gh+d+v++++f++ +++ vsG
   Q: 297 DVHW-LDGETFATGGSDRNIKIWKVDGHGGytrIGTLAGSNAAFTRIDYERDRKHFIASSNDKNVRIWNLDNSRLLSTLSGHSDQVTCVKFYQ-SHSAVSG 395
    5555.58999****************9766788************************************************************.999**** PP
   S: 113 shdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtg 212
    s+dr+i++wd++++ c++ l + ++v +++ ++ + +l++sG+ D+++r++d ++ + +rt ++++sl+++ +g el+ +d t+ l dl+t
   Q: 396 SADRVIKIWDIQNQRCSR-SLFPASKVLDVATNMGASpSLFASGHFDKKLRFYDGRSTDPVRTVD--MGGRITSLDVTMSGCELLVSTRDDTISLIDLRTF 493
    ******************.9999999999999999999**************************5..69******************************88 PP
   S: 213 ecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
    ++v+ + + + + ++v +s+ +e+++ gss gsi++W+ s +l k+l ++ i + +++++ l++ s+ + v +wk
   Q: 494 QTVHCYSAENyrtsSDLSRVVLSSGNEYVAAGSSNGSIFVWNRNSTKLEKQLCSNSENAIFSLSWNPTGYGLLSSSKQKFVTLWK 578
    888888777766667888899999**************************99888877777777899999999999999999997 PP
   

Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MQTRSIDNVV NWSRCVHPSC VAWVIFIHFC FAKNCSILYF VLFQFTFFAE LMADSYRKLI 60
IERLEDVKQR NKQTATLYNN YSKLAEQLEK KHKYGTSSSN SSQLETGELA RVKEEMAELY 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cel-018131|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCAAACGC GCTCTATTGA CAACGTAGTA AACTGGTCAC GCTGTGTTCA CCCGAGTTGT 60
GTTGCTTGGG TTATTTTTAT CCACTTTTGT TTCGCAAAAA ATTGCTCAAT ACTTTATTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cel-018131|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005737--C:cytoplasm
GO:0035973--P:aggrephagy
GO:0000045--P:autophagosome assembly

KEGG cel:CELE_F02E8.5
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000090 Aegilops tauschii 23.78 6.00e-25 107.00
IUUC-Aml-002242 Ailuropoda melanoleuca 28.92 2.00e-54 205.00
IUUC-Apl-003384 Anas platyrhynchos 30.48 2.00e-65 242.00
IUUC-Aca-004962 Anolis carolinensis 39.33 2.00e-59 222.00
IUUC-Aly-005435 Arabidopsis lyrata 28.53 7.00e-32 130.00
IUUC-Ath-006948 Arabidopsis thaliana 29.13 1.00e-32 132.00
IUUC-Ame-010915 Astyanax mexicanus 39.60 1.00e-54 205.00
IUUC-Bta-012388 Bos taurus 38.67 4.00e-58 218.00
IUUC-Bdi-014231 Brachypodium distachyon 27.78 5.00e-27 114.00
IUUC-Bol-016174 Brassica oleracea 29.64 3.00e-32 131.00
IUUC-Bra-017165 Brassica rapa 29.64 4.00e-32 131.00
IUUC-Cfa-020484 Canis familiaris 31.03 4.00e-63 234.00
IUUC-Cpo-022156 Cavia porcellus 30.96 1.00e-63 236.00
IUUC-Csa-024019 Chlorocebus sabaeus 31.98 2.00e-66 245.00
IUUC-Dre-027702 Danio rerio 39.00 2.00e-57 215.00
IUUC-Dno-029728 Dasypus novemcinctus 39.33 4.00e-59 221.00
IUUC-Eca-034214 Equus caballus 31.76 3.00e-58 218.00
IUUC-Eeu-034537 Erinaceus europaeus 29.81 2.00e-51 195.00
IUUC-Fca-036005 Felis catus 38.56 5.00e-58 217.00
IUUC-Fal-037593 Ficedula albicollis 37.39 8.00e-61 226.00
IUUC-Gmo-039042 Gadus morhua 28.04 7.00e-50 190.00
IUUC-Gga-040986 Gallus gallus 37.93 5.00e-60 224.00
IUUC-Gac-041351 Gasterosteus aculeatus 39.00 3.00e-58 218.00
IUUC-Ggo-045427 Gorilla gorilla 39.33 1.00e-58 219.00
IUUC-Hsa-046632 Homo sapiens 30.65 4.00e-63 234.00
IUUC-Itr-048504 Ictidomys tridecemlineatus 31.85 1.00e-64 239.00
IUUC-Lch-050669 Latimeria chalumnae 32.79 2.00e-41 161.00
IUUC-Lpe-051254 Leersia perrieri 26.25 1.00e-25 110.00
IUUC-Loc-052610 Lepisosteus oculatus 38.21 3.00e-58 218.00
IUUC-Mcc-055504 Macaca mulatta 39.33 9.00e-59 220.00
IUUC-Meu-056516 Macropus eugenii 37.67 4.00e-58 218.00
IUUC-Mga-059777 Meleagris gallopavo 30.80 4.00e-65 241.00
IUUC-Mmr-061298 Microcebus murinus 39.33 5.00e-59 221.00
IUUC-Mdo-062969 Monodelphis domestica 39.00 4.00e-59 221.00
IUUC-Mmu-064076 Mus musculus 39.33 2.00e-59 222.00
IUUC-Mac-065161 Musa acuminata 29.32 3.00e-30 125.00
IUUC-Mpu-066196 Mustela putorius furo 38.87 1.00e-58 219.00
IUUC-Mlu-067651 Myotis lucifugus 31.10 4.00e-65 241.00
IUUC-Nle-069853 Nomascus leucogenys 29.91 3.00e-60 224.00
IUUC-Ont-072489 Oreochromis niloticus 38.67 2.00e-58 218.00
IUUC-Oan-072703 Ornithorhynchus anatinus 37.67 9.00e-57 213.00
IUUC-Ocu-074205 Oryctolagus cuniculus 38.00 8.00e-57 213.00
IUUC-Ola-086964 Oryzias latipes 33.90 6.00e-45 172.00
IUUC-Oga-088765 Otolemur garnettii 31.01 2.00e-63 235.00
IUUC-Oar-090196 Ovis aries 39.86 2.00e-53 202.00
IUUC-Ptr-091676 Pan troglodytes 30.65 4.00e-63 234.00
IUUC-Pan-092068 Papio anubis 39.33 1.00e-58 219.00
IUUC-Psi-093367 Pelodiscus sinensis 30.73 7.00e-65 240.00
IUUC-Ppa-095699 Physcomitrella patens 26.30 4.00e-27 114.00
IUUC-Pfo-096067 Poecilia formosa 39.67 2.00e-59 222.00
IUUC-Pab-098111 Pongo abelii 39.33 1.00e-58 219.00
IUUC-Pva-102871 Pteropus vampyrus 37.81 2.00e-57 215.00
IUUC-Rno-106088 Rattus norvegicus 39.33 2.00e-59 222.00
IUUC-Sha-106984 Sarcophilus harrisii 30.91 1.00e-64 239.00
IUUC-Sit-110828 Setaria italica 27.39 5.00e-28 117.00
IUUC-Ssc-116241 Sus scrofa 30.55 6.00e-57 214.00
IUUC-Tgu-116576 Taeniopygia guttata 29.56 7.00e-66 243.00
IUUC-Tru-118336 Takifugu rubripes 35.00 1.00e-44 173.00
IUUC-Tsy-119006 Tarsius syrichta 39.33 1.00e-58 219.00
IUUC-Tni-120300 Tetraodon nigroviridis 29.19 3.00e-62 231.00
IUUC-Tur-126463 Triticum urartu 23.33 4.00e-25 108.00
IUUC-Tbe-127631 Tupaia belangeri 32.46 2.00e-60 225.00
IUUC-Ttr-129005 Tursiops truncatus 39.76 2.00e-50 192.00
IUUC-Vpa-130246 Vicugna pacos 34.50 3.00e-31 128.00
Created Date 25-Jun-2017

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