iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043265

UUCD1 version

UUC-GlM-03417

Ensembl Protein ID

GLYMA17G13520.2

UniProt Accession

I1MUK8; I1MUK8_SOYBN

Genbank Protein ID

KRH03886.1; KRH03887.1; KRH03888.1; KRH03889.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000850; CM000850; CM000850; CM000850

Gene Name

LOC100806054; GLYMA_17G126200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA17G13520	GLYMA17G13520.2	GLYMA17G13520.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-26	92.0	312	349
UBD/Beta-Prp	3.40e-50	172.6	228	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHtd+v++++    s++++vs+++D tikvWDl +g +
   Q: 312  GHTDKVCAVDVskiSSRHVVSAAYDRTIKVWDLVKGYC 349
           8*********999977*****************98866 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           +h++ + ++ f  ++s l+tg++d+ +k wd+ tg+l ++l g+ + v ++++ +d +  + +s+ ++++vwd+++g   htl+gh+d+v++++
   Q: 228  AHEGGCASMLFEYNSSKLITGGQDRLVKMWDANTGSLSSTLHGCLGSVLDLTITHDNQSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVD 321
           5666778899*99********************************************************************************* PP
   S: 102  fsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           +s+ s+ ++vs+  drti+vwdl +g+c +++  + ++  n+++++ dg+ ++sG+ D+ +rlWd++tgkll +    h  +v+sls+++ng+ 
   Q: 322  VSKiSSRHVVSAAYDRTIKVWDLVKGYCTNTV--IFRSNCNSLSFSMDGQTIFSGHVDGNLRLWDIQTGKLLSEVAA-HSLAVTSLSLSRNGNV 412
           ***777***********************953..3344589**********************************98.**************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgs 284
           +++ ++d+  +l+d+++ e+  tl++      +n ++   sp+d++++ gs+Dgs++iW + +gd+++tl+ h ssv ++   s   + l++++
   Q: 413  VLTSGRDNLHNLFDVRSLEVCGTLKAMGnrvaSNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRW-SGIAKPLASAD 505
           ************************99884444555556677***************************************99.55577899999 PP
   S: 285  edskvniw 292
           ++++v +w
   Q: 506  KNGIVCVW 513
           99999999 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKARKSQEE IASEAIKHAL KALRKRHLLE EAAHAPTVLA LSRPIVSQGS EWKEKAENLQ 60
MELQQCYKAQ SRLSEQLVVE VAESRASKTS LQEKENALAD LQKELTELRD ECSQLKVDLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTAGGTGTA CACTTTCCCT TTTCTTTTCT ATCTAAAAAA ATTCATTCCC TTGCCTTGCA 60
TGCGTTTTCA CTTTTTCCTA TTCCAATCAC TTTTCCGGCG TTACACCTTT CTATCCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

KEGG

gmx:100806054

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003384	Anas platyrhynchos	28.98	8.00e-54	204.00
IUUC-Aca-004962	Anolis carolinensis	34.98	1.00e-46	181.00
IUUC-Ath-006948	Arabidopsis thaliana	73.37	0.00e+00	788.00
IUUC-Ame-010915	Astyanax mexicanus	34.65	2.00e-40	159.00
IUUC-Bol-016174	Brassica oleracea	73.82	0.00e+00	772.00
IUUC-Bra-017165	Brassica rapa	73.37	0.00e+00	777.00
IUUC-Cpo-022156	Cavia porcellus	28.54	5.00e-50	192.00
IUUC-Csa-024019	Chlorocebus sabaeus	29.32	3.00e-52	199.00
IUUC-Dre-027702	Danio rerio	34.98	1.00e-46	181.00
IUUC-Dme-031595	Drosophila melanogaster	32.67	3.00e-39	156.00
IUUC-Eca-034214	Equus caballus	29.86	9.00e-43	167.00
IUUC-Eeu-034537	Erinaceus europaeus	27.80	2.00e-43	170.00
IUUC-Gga-040986	Gallus gallus	35.20	2.00e-47	184.00
IUUC-Meu-056516	Macropus eugenii	33.67	1.00e-46	181.00
IUUC-Mga-059777	Meleagris gallopavo	29.06	3.00e-52	199.00
IUUC-Mmu-064076	Mus musculus	34.11	1.00e-47	184.00
IUUC-Mlu-067651	Myotis lucifugus	28.76	2.00e-51	196.00
IUUC-Olo-080408	Oryza longistaminata	57.53	7.00e-152	530.00
IUUC-Opu-083918	Oryza punctata	57.53	8.00e-152	530.00
IUUC-Olu-087622	Ostreococcus lucimarinus	35.23	5.00e-70	258.00
IUUC-Oga-088765	Otolemur garnettii	28.49	6.00e-52	198.00
IUUC-Oar-090196	Ovis aries	33.93	6.00e-44	171.00
IUUC-Psi-093367	Pelodiscus sinensis	28.96	4.00e-50	192.00
IUUC-Pop-099116	Populus trichocarpa	81.89	0.00e+00	863.00
IUUC-Pca-100680	Procavia capensis	35.43	3.00e-35	143.00
IUUC-Pgr-103597	Puccinia graminis	29.84	2.00e-27	118.00
IUUC-Rno-106088	Rattus norvegicus	33.77	9.00e-48	184.00
IUUC-Sha-106984	Sarcophilus harrisii	28.87	3.00e-52	199.00
IUUC-Sit-110828	Setaria italica	58.20	2.00e-161	562.00
IUUC-Sbi-114819	Sorghum bicolor	57.14	3.00e-157	548.00
IUUC-Ssc-116241	Sus scrofa	27.38	1.00e-46	181.00
IUUC-Tgu-116576	Taeniopygia guttata	28.85	2.00e-53	203.00
IUUC-Tni-120300	Tetraodon nigroviridis	33.67	2.00e-45	177.00
IUUC-Tbe-127631	Tupaia belangeri	28.66	4.00e-46	179.00
IUUC-Xtr-132798	Xenopus tropicalis	25.77	2.00e-40	160.00
IUUC-Xma-133264	Xiphophorus maculatus	26.83	3.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence