iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098847

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_780658; POPTR_0019s11640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s11640	POPTR_0019s11640.1	POPTR_0019s11640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-07	31.8	178	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cledf+  +++  lpC Hvfh +C+ +w         + +CP+Cr
   Q: 178  CVVCLEDFSSSVKLtkLPCSHVFHDKCIFRW------LLYSKSCPICR 219
           ********7765543488*************......667888****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEVTRVDVNL HTVNTDVFDP GNYDPMFLVQ ITLQRKLEMW LSVIDQEELL MAGQHQIDSE 60
SGCVFEVPIQ EVAVPASFIH YLAQRISGFN FDASLCVDLA SLIASHAYHL EGHCRGFYVS 120

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Nucleotide Sequence
(Fasta)

ATGGAAGTTA CAAGAGTTGA TGTTAACCTA CATACAGTGA ACACAGATGT GTTCGATCCG 60
GGGAATTATG ATCCTATGTT CCTTGTTCAA ATTACGTTAC AAAGAAAGCT TGAAATGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0019s11640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005630	Arabidopsis lyrata	48.28	9.00e-12	62.80
IUUC-Ath-007522	Arabidopsis thaliana	51.72	4.00e-12	63.90
IUUC-Csv-026249	Ciona savignyi	37.50	3.00e-11	60.50
IUUC-Ogu-078372	Oryza glumaepatula	40.00	2.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence