iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105760

Ensembl Protein ID

ENSRNOP00000060529.2

UniProt Accession

D3ZNR1; D3ZNR1_RAT

Genbank Protein ID

ENSRNOP00000060529

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC119015

Gene Name

RGD1304870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000029479.4	ENSRNOT00000051823.4	ENSRNOP00000060529.2

Annotation

Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.10e-06	28.8	19	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 18   npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyg 60
            +s+tV+eLK+ +++ l+ ppe+q L  ++++L++ ktL d+g
   Q: 19   QESSTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCG 61
           6899**************************************8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEVFLMIRRK KTTIFAEAQE SSTVLELKRI VQGILKRPPE EQLLFKDDQL LDESKTLRDC 60
GFTSQIAKAQ DPATVALVFR EDASEGVQIH PYSTPLLPSV MKTGTDSLSD EIKSGLD 117

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGTGT TTCTTATGAT CAGGCGAAAG AAGACCACCA TCTTCGCTGA GGCCCAGGAG 60
TCGAGCACGG TCTTAGAGCT GAAGCGCATT GTCCAGGGCA TCCTGAAGAG GCCTCCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0070449--C:elongin complex
GO:0030891--C:VCB complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005974	Arabidopsis lyrata	31.03	2.00e-06	43.90
IUUC-Ath-007691	Arabidopsis thaliana	28.74	3.00e-06	42.70
IUUC-Bdi-014917	Brachypodium distachyon	29.41	1.00e-07	47.40
IUUC-Lpe-051645	Leersia perrieri	33.33	7.00e-09	51.60
IUUC-Obr-076724	Oryza brachyantha	33.72	4.00e-08	49.30
IUUC-Oin-080167	Oryza indica	32.53	6.00e-07	45.10
IUUC-Opu-084014	Oryza punctata	32.56	2.00e-07	47.00
IUUC-Osa-085650	Oryza sativa	32.53	6.00e-07	45.10
IUUC-Ppa-095566	Physcomitrella patens	32.93	3.00e-06	43.10
IUUC-Sly-111382	Solanum lycopersicum	28.26	6.00e-07	45.10
IUUC-Stu-112245	Solanum tuberosum	27.00	1.00e-06	44.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence