iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043931

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000834

Gene Name

LOC100792437; GLYMA_01G023900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G02941	GLYMA01G02941.1	GLYMA01G02941.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.70e-72	244.4	412	714

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl+N gN+CY N+vLQcL+ +++l+++l++  +++++     +++  +++++++ l+++  k+  +  sp  +l++++k+ +++   +++Da+
   Q: 412  FGLTNCGNSCYANAVLQCLAYTRPLTSYLFQgFHSKRC-----QKKGWCFTCEFEYLIQKA-KEGISPLSPIGILSKIHKIGSHLGRGKEEDAH 499
           6******************************3334444.....45678**********999.99999*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           Efl++ +d++++ +                  l++   +++  ++++l+  +F+g l+s+ikcl+c  +s+r+e ++dl++++ g+      +l
   Q: 500  EFLRCAVDTMQSVC------------------LKEVGVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIG----TL 571
           **************..................444566789999******************************************95....8* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
           +++L +ft++e l+++nky+c++ck + +a+kkl++ + P++L++ LkRf   ++ ++ ek+nk+v+fp+ L+++p+++ +++k   +  Y+L+
   Q: 572  EEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRF---QS-GNFEKLNKSVQFPEVLNMAPYMSGTKDK---SPLYSLY 658
           **************************************************...33.4557********************6655...79***** PP
   S: 282  avvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           avvvH      + sGHYv+yvkn +g+W++ dDs+V++v+ ++vl+   + aY+l+Y r
   Q: 659  AVVVHLDimnAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLS---ERAYMLLYAR 714
           *****873325569********************************...********87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLVPGILGFP GLVYLVLALG FAVIRHVWRN AEAKREEEAV MMMRLVADAD VTEMEVAEEA 60
VAVASEVEYS SLAPVNGSRW YQCAMCCAPT TMRCSRCKAV RYCSGKCQIS HWRQGHKDEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCATTAATC CAATGTTGAG CAATAGTGGG TACACAATCC CTTTTCCACT AGCATTTATT 60
TATTTGATTT TTTTTTAAGA AAAAAAAAAT AAGAGTTGAG AAGTTACTGT AGAATGATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100792437

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006266	Arabidopsis lyrata	63.10	5.00e-151	528.00
IUUC-Ath-007508	Arabidopsis thaliana	63.55	6.00e-149	521.00
IUUC-Bol-015937	Brassica oleracea	65.34	1.00e-142	500.00
IUUC-Bra-017119	Brassica rapa	63.95	2.00e-146	512.00
IUUC-Ppe-101893	Prunus persica	51.67	0.00e+00	711.00
IUUC-Sbi-114259	Sorghum bicolor	44.93	2.00e-146	513.00
IUUC-Tca-121704	Theobroma cacao	49.11	0.00e+00	732.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence