iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+d ++g    ++ +CgH+fh +C+  w        ++ +CP+Cr
   Q: 171  CSICLQDWEEGevgRKLARCGHTFHMNCIDEW------LLRQETCPICR 213
           ********87644344677*************......999999****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGISKMILLK FTYVVSFWIT CVIFKMSRTI KRALLGSFIF ILASASVVVA AIVGAIEGHT 60
TDIGFLQGSV LGVVAGVITA VQLFGPVLHS DQPLSKVALL RRVVNGKAIM GLVRPFVLKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTCCACA CCACTCTCCA ATTCAAGCTC TCACCCCATA AATAGACAAA TTCAAAATAT 60
CTTATAAGAG AAAGAAAAAA AATCAATTAG TCTTCCATCT TTTCTTCATG GGCATTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G20395

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005906	Arabidopsis lyrata	89.40	7.00e-105	372.00
IUUC-Bci-013776	Botrytis cinerea	41.51	2.00e-09	54.70
IUUC-Bol-015772	Brassica oleracea	70.48	1.00e-73	269.00
IUUC-Bra-017633	Brassica rapa	72.39	4.00e-56	208.00
IUUC-Gma-042741	Glycine max	43.11	2.00e-31	128.00
IUUC-Mtr-058031	Medicago truncatula	40.49	6.00e-27	113.00
IUUC-Pop-099650	Populus trichocarpa	46.07	7.00e-39	152.00
IUUC-Ppe-101838	Prunus persica	42.73	1.00e-35	142.00
IUUC-Sly-111606	Solanum lycopersicum	44.86	2.00e-35	141.00
IUUC-Stu-112026	Solanum tuberosum	42.41	3.00e-33	134.00
IUUC-Tca-121589	Theobroma cacao	41.30	6.00e-31	127.00
IUUC-Vvi-131688	Vitis vinifera	44.39	8.00e-44	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence