iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121589

Ensembl Protein ID

EOY12355

UniProt Accession

A0A061F4S8; A0A061F4S8_THECC

Genbank Protein ID

EOY12355.1

Protein Name

RING/U-box superfamily protein, putative isoform 3

Genbank Nucleotide ID

CM001885

Gene Name

TCM_030882

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_030882	EOY12353	EOY12353
TCM_030882	EOY12355	EOY12355
TCM_030882	EOY12354	EOY12354

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-09	36.8	218	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++kdg   + lp CgH+fh++C+  w       s++ +CP Cr
   Q: 218  CSICLQELKDGelARNLPrCGHIFHLNCIDEW------LSRQGTCPMCR 260
           ********99865444556*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLKEWLPGIT EVAFRCGGAV SLWFFAAMRD LGIGFLIGVL KRTFFAAVTC IFALGGAIVG 60
TVVGAMKGQT TETGFFRGAG IGAVAGAITA VQLLESLANG ESLSKVALLV SLVNGKVFIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCATTAAA AACCAGCCCT TTCATTTTTT TTCTGATATT CAAGCAACAG CTTTCACCCT 60
CTTTTCCTTC TCTGCCCCCC TTTTTTGAGC TCTTTTCCAA TGTTAAAGGA GTGGCTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005906	Arabidopsis lyrata	42.21	3.00e-33	133.00
IUUC-Ath-006813	Arabidopsis thaliana	41.30	5.00e-35	139.00
IUUC-Gma-042887	Glycine max	46.55	9.00e-54	202.00
IUUC-Mtr-058031	Medicago truncatula	47.60	4.00e-41	160.00
IUUC-Mac-065535	Musa acuminata	45.81	1.00e-46	180.00
IUUC-Olu-087781	Ostreococcus lucimarinus	44.26	2.00e-14	70.50
IUUC-Pop-099650	Populus trichocarpa	53.58	6.00e-67	246.00
IUUC-Ppe-101838	Prunus persica	51.33	3.00e-63	233.00
IUUC-Sly-111606	Solanum lycopersicum	52.17	3.00e-56	210.00
IUUC-Stu-112026	Solanum tuberosum	52.89	2.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence