iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005569

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348715

Gene Name

UBC12; ARALYDRAFT_671660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0003_857	Al_scaffold_0003_857	Al_scaffold_0003_857

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	3.30e-56	189.6	6	140

Active Site

Position(s)	Description	Evidence
87	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkee 89
           R+ +el +l++dpp+++sa+pv e+d+++w+++i+Gp+d+p+ ggvF ++i+fp+dYPfkPPkv+f tk++hPn+++nG++Cl+ilk  
   Q: 6    RISRELRDLQRDPPANCSAGPVAEKDMYHWQATIMGPHDSPFSGGVFLVNIHFPSDYPFKPPKVSFKTKVYHPNINSNGSICLDILK-- 92
           899***********************************************************************************9.. PP
   S: 90   ekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           e+Wspal++++vllsi+sll++pnp++pl +e+a+l+k+n+++y++ +
   Q: 93   EQWSPALTISKVLLSICSLLTDPNPNDPLVAEIAQLYKENKSKYESVA 140
           ********************************************9876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSALNRISRE LRDLQRDPPA NCSAGPVAEK DMYHWQATIM GPHDSPFSGG VFLVNIHFPS 60
DYPFKPPKVS FKTKVYHPNI NSNGSICLDI LKEQWSPALT ISKVLLSICS LLTDPNPNDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTT TGAATCGGAT TTCAAGGGAA CTCAGGGACC TTCAGAGGGA TCCTCCTGCA 60
AACTGTAGCG CAGGTAAAAT CTCCCTTTGC TTGGCTGATT TTAACTGATT GATTCACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

aly:ARALYDRAFT_671660

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence