iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095793

Ensembl Protein ID

PP1S19_18V6.1

UniProt Accession

A9RNP7; A9RNP7_PHYPA

Genbank Protein ID

EDQ79336.1

Protein Name

Bromodomain and WD repeat domain-containing protein

Genbank Nucleotide ID

DS544908

Gene Name

BRWD1501; PHYPADRAFT_176689

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S19_18V6	PP1S19_18V6.1	PP1S19_18V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-27	93.9	320	353
UBD/Beta-Prp	6.60e-51	174.0	232	494

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWD 29
           gHt+svt++af      ++ll+s+sdDgt+++WD
   Q: 320  GHTASVTAIAFsprqgCEHLLLSSSDDGTCRIWD 353
           8************97433899************* PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           k+l+gh+ +v +   f   +++++tgs+d+ +k+w+ +tg +lrs  ghe+ +t++  s++ k+ +++s+D ti+vw l +g +v++l+gh++sv+
   Q: 232  KKLRGHRNAVYC-AIFDGTGRYVITGSDDRLVKLWSSETGLCLRSCRGHEGDITDLAVSNRNKYVASASNDFTIRVWFLPSGNPVSVLRGHTASVT 326
           567777776666.9999******************************************************************************* PP
   S: 99   slsfsp.sg..dklvsGshdrtirvwdletgqclee......................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl... 166
           +++fsp +g  + l+s s+d t r+wd +  +  +                       t  g ++ + c +++ dg+++v+Gs D++ r+Wd    
   Q: 327  AIAFSPrQGceHLLLSSSDDGTCRIWDASDSSLHSRvympnpkdvasaprptipappsTVPGCNQ-ILCCAFNADGSIFVTGSSDKIARVWDAckw 421
           ******9555599*************9887776666*****************997655555554.456679999********************* PP
   S: 167  ......ktgkllrtltgghtdsvyslsfdsng..........................kelvsgsldgtvklwd 208
                 + +  ++tl+g h+++v+ ++f+                              ++v++s+dgt ++w 
   Q: 422  nddvtgRPNYEMDTLKG-HENDVNYVQFSGCAaprkplvgdsmkdehatrfrnswfshDSIVTCSRDGTAIIWM 494
           ***88888888888898.*********666666666667777777778888888888899*************5 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MARSTKDRPD YLGRFSAPVV AGSSGTAYGA DTCPENNVEV DIAEVYFLIM HFLSSGPCQR 60
AFAQLSNDVL QHKLLPRRFH ALSSRAEKHV VDEGDDGMSS PLSYANILAR NPTVQQNHLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAGAT CTACCAAGGA CCGGCCTGAT TACTTGGGTC GTTTCAGTGC ACCTGTAGTG 60
GCTGGGAGCT CAGGAACAGC CTATGGTGCG GATACTTGCC CCGAGAACAA TGTCGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0007010--P:cytoskeleton organization
GO:0008360--P:regulation of cell shape
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

ppp:PHYPADRAFT_176689

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	46.34	0.00e+00	636.00
IUUC-Aml-001881	Ailuropoda melanoleuca	28.89	2.00e-68	254.00
IUUC-Atr-002600	Amborella trichopoda	58.43	0.00e+00	825.00
IUUC-Apl-003700	Anas platyrhynchos	30.62	1.00e-58	221.00
IUUC-Aca-004474	Anolis carolinensis	29.78	7.00e-72	266.00
IUUC-Aly-006517	Arabidopsis lyrata	56.96	0.00e+00	816.00
IUUC-Ath-006577	Arabidopsis thaliana	56.54	0.00e+00	813.00
IUUC-Ame-010718	Astyanax mexicanus	28.36	5.00e-73	270.00
IUUC-Bta-013217	Bos taurus	29.96	4.00e-71	263.00
IUUC-Bdi-014797	Brachypodium distachyon	57.51	1.00e-171	597.00
IUUC-Bol-016525	Brassica oleracea	57.01	0.00e+00	799.00
IUUC-Bra-017961	Brassica rapa	59.35	0.00e+00	774.00
IUUC-Cja-018868	Callithrix jacchus	29.79	2.00e-71	264.00
IUUC-Cfa-021037	Canis familiaris	29.70	4.00e-71	263.00
IUUC-Cpo-021934	Cavia porcellus	29.02	3.00e-71	264.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	33.97	9.00e-33	135.00
IUUC-Csa-023618	Chlorocebus sabaeus	29.79	1.00e-71	265.00
IUUC-Cho-024690	Choloepus hoffmanni	27.47	3.00e-32	134.00
IUUC-Cin-025553	Ciona intestinalis	27.38	5.00e-23	102.00
IUUC-Csv-025813	Ciona savignyi	25.17	3.00e-49	189.00
IUUC-Dre-028029	Danio rerio	28.99	2.00e-69	257.00
IUUC-Dno-030048	Dasypus novemcinctus	29.49	1.00e-64	242.00
IUUC-Dor-031052	Dipodomys ordii	27.05	2.00e-39	158.00
IUUC-Dme-031752	Drosophila melanogaster	26.70	3.00e-59	224.00
IUUC-Ete-032717	Echinops telfairi	30.65	2.00e-35	145.00
IUUC-Eca-034349	Equus caballus	30.25	8.00e-65	243.00
IUUC-Eeu-034871	Erinaceus europaeus	27.71	2.00e-40	161.00
IUUC-Fca-036099	Felis catus	29.04	1.00e-68	255.00
IUUC-Fal-037307	Ficedula albicollis	29.04	7.00e-70	259.00
IUUC-Gmo-039116	Gadus morhua	25.85	9.00e-26	112.00
IUUC-Gga-040865	Gallus gallus	29.08	1.00e-68	255.00
IUUC-Gac-042435	Gasterosteus aculeatus	27.44	4.00e-56	213.00
IUUC-Gma-044324	Glycine max	56.00	0.00e+00	798.00
IUUC-Ggo-045500	Gorilla gorilla	29.84	2.00e-71	264.00
IUUC-Hsa-046350	Homo sapiens	29.96	4.00e-71	263.00
IUUC-Hvu-047706	Hordeum vulgare	67.23	2.00e-123	434.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	25.84	4.00e-23	102.00
IUUC-Lch-049662	Latimeria chalumnae	28.70	4.00e-72	267.00
IUUC-Lpe-051619	Leersia perrieri	56.05	0.00e+00	803.00
IUUC-Loc-052853	Lepisosteus oculatus	29.38	2.00e-66	248.00
IUUC-Laf-053848	Loxodonta africana	29.00	3.00e-70	261.00
IUUC-Mcc-054638	Macaca mulatta	29.56	8.00e-71	262.00
IUUC-Meu-056321	Macropus eugenii	28.67	2.00e-53	204.00
IUUC-Mtr-057637	Medicago truncatula	40.31	3.00e-62	234.00
IUUC-Mga-060165	Meleagris gallopavo	28.76	6.00e-67	249.00
IUUC-Mmr-061227	Microcebus murinus	29.31	5.00e-72	266.00
IUUC-Mdo-062074	Monodelphis domestica	28.94	2.00e-70	261.00
IUUC-Mmu-064075	Mus musculus	29.38	1.00e-70	262.00
IUUC-Mac-065343	Musa acuminata	56.73	0.00e+00	860.00
IUUC-Mpu-066628	Mustela putorius furo	28.89	4.00e-70	259.00
IUUC-Mlu-068082	Myotis lucifugus	28.74	1.00e-68	254.00
IUUC-Nle-069402	Nomascus leucogenys	30.10	8.00e-71	262.00
IUUC-Opr-070971	Ochotona princeps	28.07	4.00e-36	147.00
IUUC-Ont-072221	Oreochromis niloticus	30.65	2.00e-72	268.00
IUUC-Oan-072954	Ornithorhynchus anatinus	28.98	5.00e-73	270.00
IUUC-Ocu-074456	Oryctolagus cuniculus	29.78	3.00e-67	250.00
IUUC-Oba-075709	Oryza barthii	55.47	0.00e+00	775.00
IUUC-Obr-076619	Oryza brachyantha	56.53	0.00e+00	804.00
IUUC-Ogl-077493	Oryza glaberrima	54.43	1.00e-162	566.00
IUUC-Ogu-078641	Oryza glumaepatula	51.57	1.00e-147	517.00
IUUC-Oin-079669	Oryza indica	53.75	2.00e-152	532.00
IUUC-Olo-080755	Oryza longistaminata	54.15	5.00e-154	538.00
IUUC-Oni-082991	Oryza nivara	51.06	2.00e-148	520.00
IUUC-Opu-083233	Oryza punctata	55.60	0.00e+00	796.00
IUUC-Oru-085195	Oryza rufipogon	55.47	0.00e+00	774.00
IUUC-Ola-086648	Oryzias latipes	30.20	3.00e-70	260.00
IUUC-Olu-087745	Ostreococcus lucimarinus	32.73	1.00e-73	271.00
IUUC-Oga-089053	Otolemur garnettii	28.74	4.00e-68	253.00
IUUC-Oar-090042	Ovis aries	28.59	3.00e-68	253.00
IUUC-Ptr-091213	Pan troglodytes	29.96	5.00e-71	263.00
IUUC-Pan-092444	Papio anubis	29.70	3.00e-71	264.00
IUUC-Psi-093271	Pelodiscus sinensis	30.98	1.00e-63	239.00
IUUC-Pma-094427	Petromyzon marinus	31.47	1.00e-34	139.00
IUUC-Pfo-097318	Poecilia formosa	28.59	8.00e-66	245.00
IUUC-Pab-097573	Pongo abelii	29.75	2.00e-68	254.00
IUUC-Pop-099185	Populus trichocarpa	52.80	0.00e+00	821.00
IUUC-Pca-101128	Procavia capensis	30.43	8.00e-59	222.00
IUUC-Ppe-101283	Prunus persica	55.30	0.00e+00	858.00
IUUC-Pva-102512	Pteropus vampyrus	28.74	5.00e-68	253.00
IUUC-Rno-105687	Rattus norvegicus	29.40	6.00e-71	263.00
IUUC-Sha-106680	Sarcophilus harrisii	29.24	5.00e-69	256.00
IUUC-Sit-110017	Setaria italica	56.16	3.00e-168	585.00
IUUC-Sly-111348	Solanum lycopersicum	56.52	0.00e+00	761.00
IUUC-Sar-113004	Sorex araneus	28.66	8.00e-67	249.00
IUUC-Sbi-114195	Sorghum bicolor	61.61	0.00e+00	702.00
IUUC-Ssc-115461	Sus scrofa	29.77	2.00e-68	254.00
IUUC-Tgu-116513	Taeniopygia guttata	28.42	1.00e-70	262.00
IUUC-Tru-117625	Takifugu rubripes	29.89	6.00e-71	263.00
IUUC-Tsy-119003	Tarsius syrichta	26.95	5.00e-56	213.00
IUUC-Tni-120716	Tetraodon nigroviridis	30.05	2.00e-70	260.00
IUUC-Tca-121615	Theobroma cacao	57.54	0.00e+00	815.00
IUUC-Tae-125478	Triticum aestivum	54.79	0.00e+00	811.00
IUUC-Tur-126809	Triticum urartu	52.84	0.00e+00	801.00
IUUC-Tbe-127479	Tupaia belangeri	37.91	2.00e-31	131.00
IUUC-Ttr-128561	Tursiops truncatus	29.66	1.00e-66	249.00
IUUC-Vpa-130160	Vicugna pacos	31.12	5.00e-63	236.00
IUUC-Vvi-131332	Vitis vinifera	55.28	0.00e+00	863.00
IUUC-Xtr-132717	Xenopus tropicalis	30.17	1.00e-71	265.00
IUUC-Xma-134120	Xiphophorus maculatus	29.91	6.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence