iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027349

Ensembl Protein ID

CMP310CT

UniProt Accession

M1V670; M1V670_CYAM1

Genbank Protein ID

BAM81905.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

AP006498

Gene Name

CYME_CMP310C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMP310C	CMP310CT	CMP310CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-17	61.1	207	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H ++v +++f +    l+s+s D+t+ vW+
   Q: 207  HDSDVLDVSFaPHgEALASCSVDNTVCVWR 236
           99*********77799*************9 PP

Organism

Cyanidioschyzon merolae

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MVIFTKPVWL RHAAGTGNGP LGVQRGFGTG EQTNSLSTSS DRRRAGADNA CVPIFSLDIQ 60
PCARDAPLDE VRLATCGQDG KIHLWRLGAL WEDAKQQCAR LLGKPGAPHE STTPQQNGAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGATTT TCACGAAACC CGTTTGGCTT CGTCACGCGG CCGGGACTGG GAACGGACCT 60
CTGGGCGTCC AACGTGGCTT TGGAACCGGG GAGCAAACAA ACAGTTTGTC AACAAGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

cme:CYME_CMP310C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	24.91	1.00e-61	229.00
IUUC-Aml-001723	Ailuropoda melanoleuca	32.68	1.00e-54	206.00
IUUC-Atr-003132	Amborella trichopoda	24.86	1.00e-66	245.00
IUUC-Apl-003197	Anas platyrhynchos	29.65	8.00e-55	206.00
IUUC-Aca-004733	Anolis carolinensis	30.87	1.00e-55	209.00
IUUC-Aly-005446	Arabidopsis lyrata	25.00	6.00e-61	226.00
IUUC-Ath-007627	Arabidopsis thaliana	24.34	2.00e-64	238.00
IUUC-Ago-007766	Ashbya gossypii	23.88	6.00e-35	140.00
IUUC-Acl-008104	Aspergillus clavatus	25.17	1.00e-37	149.00
IUUC-Afl-008591	Aspergillus flavus	25.87	4.00e-37	147.00
IUUC-Afu-008781	Aspergillus fumigatus	26.39	7.00e-38	150.00
IUUC-Ani-009272	Aspergillus nidulans	24.65	2.00e-29	122.00
IUUC-Ang-009655	Aspergillus niger	25.70	2.00e-37	149.00
IUUC-Aor-010119	Aspergillus oryzae	26.22	2.00e-37	149.00
IUUC-Ate-010530	Aspergillus terreus	24.06	7.00e-31	127.00
IUUC-Bgr-012237	Blumeria graminis	24.69	5.00e-33	134.00
IUUC-Bta-013320	Bos taurus	29.60	7.00e-56	210.00
IUUC-Bci-013795	Botrytis cinerea	25.99	4.00e-35	141.00
IUUC-Bdi-014075	Brachypodium distachyon	26.13	2.00e-67	248.00
IUUC-Bol-016440	Brassica oleracea	25.62	9.00e-69	253.00
IUUC-Bra-016651	Brassica rapa	24.79	2.00e-65	241.00
IUUC-Cel-018692	Caenorhabditis elegans	25.47	2.00e-29	122.00
IUUC-Cja-018987	Callithrix jacchus	30.97	1.00e-53	202.00
IUUC-Cfa-020132	Canis familiaris	32.68	1.00e-54	206.00
IUUC-Cpo-021484	Cavia porcellus	32.68	8.00e-55	206.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	30.06	5.00e-45	174.00
IUUC-Csa-023081	Chlorocebus sabaeus	29.00	1.00e-55	209.00
IUUC-Cin-025182	Ciona intestinalis	28.75	3.00e-56	211.00
IUUC-Csv-026154	Ciona savignyi	29.91	8.00e-54	203.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	27.10	7.00e-35	140.00
IUUC-Cne-026891	Cryptococcus neoformans	29.53	1.00e-45	175.00
IUUC-Dre-027655	Danio rerio	30.57	8.00e-56	209.00
IUUC-Dno-029557	Dasypus novemcinctus	36.14	7.00e-51	193.00
IUUC-Dor-030687	Dipodomys ordii	32.72	7.00e-44	170.00
IUUC-Dse-031334	Dothistroma septosporum	25.48	5.00e-37	147.00
IUUC-Dme-031746	Drosophila melanogaster	30.62	6.00e-55	207.00
IUUC-Ete-032384	Echinops telfairi	29.50	2.00e-40	158.00
IUUC-Eca-033430	Equus caballus	28.73	5.00e-55	207.00
IUUC-Fca-036121	Felis catus	28.86	5.00e-55	207.00
IUUC-Fal-036817	Ficedula albicollis	29.21	5.00e-55	207.00
IUUC-Fox-037906	Fusarium oxysporum	26.57	3.00e-33	134.00
IUUC-Fso-038409	Fusarium solani	26.13	8.00e-36	143.00
IUUC-Gmo-039151	Gadus morhua	32.68	1.00e-54	206.00
IUUC-Ggr-040016	Gaeumannomyces graminis	25.29	1.00e-32	132.00
IUUC-Gga-040936	Gallus gallus	29.87	4.00e-56	211.00
IUUC-Gac-041405	Gasterosteus aculeatus	32.69	4.00e-52	197.00
IUUC-Gma-042800	Glycine max	29.09	2.00e-57	215.00
IUUC-Ggo-045430	Gorilla gorilla	29.00	3.00e-55	208.00
IUUC-Hsa-046442	Homo sapiens	29.00	3.00e-55	208.00
IUUC-Hvu-047587	Hordeum vulgare	25.60	4.00e-63	234.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	31.48	2.00e-41	160.00
IUUC-Kpa-049145	Komagataella pastoris	26.29	3.00e-37	148.00
IUUC-Lch-050474	Latimeria chalumnae	31.24	7.00e-54	203.00
IUUC-Lpe-051209	Leersia perrieri	28.52	1.00e-51	196.00
IUUC-Loc-052119	Lepisosteus oculatus	30.15	2.00e-52	198.00
IUUC-Lma-053237	Leptosphaeria maculans	27.13	2.00e-33	135.00
IUUC-Laf-053718	Loxodonta africana	28.70	9.00e-56	209.00
IUUC-Mcc-055621	Macaca mulatta	30.75	3.00e-53	201.00
IUUC-Meu-055914	Macropus eugenii	35.16	7.00e-39	153.00
IUUC-Mor-057090	Magnaporthe oryzae	26.67	3.00e-35	141.00
IUUC-Mpo-057364	Magnaporthe poae	25.29	4.00e-33	134.00
IUUC-Mtr-057744	Medicago truncatula	24.45	3.00e-63	234.00
IUUC-Mla-058914	Melampsora laricipopulina	28.49	2.00e-41	162.00
IUUC-Mga-060181	Meleagris gallopavo	29.87	3.00e-56	211.00
IUUC-Mvi-060432	Microbotryum violaceum	31.36	5.00e-44	170.00
IUUC-Mmr-060871	Microcebus murinus	29.18	3.00e-56	211.00
IUUC-Mdo-062301	Monodelphis domestica	32.68	3.00e-54	204.00
IUUC-Mmu-063888	Mus musculus	29.00	7.00e-56	210.00
IUUC-Mac-065137	Musa acuminata	24.88	3.00e-64	237.00
IUUC-Mpu-066732	Mustela putorius furo	32.68	9.00e-55	206.00
IUUC-Mlu-067542	Myotis lucifugus	29.00	3.00e-55	208.00
IUUC-Nfi-068396	Neosartorya fischeri	25.80	5.00e-37	147.00
IUUC-Ncr-068842	Neurospora crassa	27.00	2.00e-35	142.00
IUUC-Nle-070156	Nomascus leucogenys	28.86	3.00e-55	207.00
IUUC-Opr-070808	Ochotona princeps	36.95	2.00e-41	162.00
IUUC-Ont-072105	Oreochromis niloticus	30.81	7.00e-53	200.00
IUUC-Ocu-074962	Oryctolagus cuniculus	28.83	1.00e-55	209.00
IUUC-Oba-075178	Oryza barthii	25.02	1.00e-61	229.00
IUUC-Obr-076399	Oryza brachyantha	29.29	1.00e-57	216.00
IUUC-Ogu-078797	Oryza glumaepatula	25.02	1.00e-61	229.00
IUUC-Oin-080085	Oryza indica	25.23	1.00e-59	222.00
IUUC-Olo-081048	Oryza longistaminata	34.14	2.00e-45	176.00
IUUC-Ome-081324	Oryza meridionalis	24.50	2.00e-61	228.00
IUUC-Oni-082548	Oryza nivara	25.02	6.00e-63	233.00
IUUC-Opu-084008	Oryza punctata	31.94	1.00e-54	206.00
IUUC-Oru-084339	Oryza rufipogon	25.07	1.00e-61	229.00
IUUC-Osa-085782	Oryza sativa	25.07	1.00e-61	229.00
IUUC-Ola-087302	Oryzias latipes	29.98	6.00e-56	210.00
IUUC-Olu-087611	Ostreococcus lucimarinus	29.15	8.00e-58	216.00
IUUC-Oga-087935	Otolemur garnettii	29.18	2.00e-56	212.00
IUUC-Oar-089229	Ovis aries	29.19	1.00e-36	146.00
IUUC-Ptr-090715	Pan troglodytes	29.00	3.00e-55	207.00
IUUC-Pan-092318	Papio anubis	29.00	2.00e-55	209.00
IUUC-Psi-094053	Pelodiscus sinensis	30.36	2.00e-52	198.00
IUUC-Pno-094985	Phaeosphaeria nodorum	24.03	1.00e-29	123.00
IUUC-Ppa-095819	Physcomitrella patens	24.80	4.00e-63	234.00
IUUC-Pfo-096857	Poecilia formosa	32.52	2.00e-49	189.00
IUUC-Pab-098047	Pongo abelii	29.00	3.00e-55	208.00
IUUC-Pop-099587	Populus trichocarpa	29.64	6.00e-54	203.00
IUUC-Pca-100558	Procavia capensis	32.43	4.00e-32	131.00
IUUC-Ppe-101261	Prunus persica	24.93	7.00e-63	233.00
IUUC-Pva-102683	Pteropus vampyrus	29.00	2.00e-55	208.00
IUUC-Pgr-103660	Puccinia graminis	33.15	3.00e-40	157.00
IUUC-Ptt-103900	Puccinia triticina	33.33	3.00e-39	154.00
IUUC-Pte-104209	Pyrenophora teres	28.74	2.00e-35	142.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	28.41	7.00e-35	140.00
IUUC-Rno-105566	Rattus norvegicus	29.00	1.00e-55	209.00
IUUC-Sce-106291	Saccharomyces cerevisiae	27.07	1.00e-38	152.00
IUUC-Sha-107514	Sarcophilus harrisii	28.91	3.00e-47	181.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	25.59	2.00e-40	158.00
IUUC-Spo-108162	Schizosaccharomyces pombe	26.51	5.00e-39	154.00
IUUC-Smo-109533	Selaginella moellendorffii	30.07	4.00e-57	214.00
IUUC-Sit-110730	Setaria italica	30.43	2.00e-59	221.00
IUUC-Sly-111547	Solanum lycopersicum	24.70	5.00e-68	250.00
IUUC-Stu-112705	Solanum tuberosum	24.61	2.00e-68	252.00
IUUC-Sar-113222	Sorex araneus	28.86	1.00e-48	186.00
IUUC-Sbi-114272	Sorghum bicolor	29.73	4.00e-59	220.00
IUUC-Sre-115061	Sporisorium reilianum	30.24	1.00e-43	169.00
IUUC-Ssc-116364	Sus scrofa	28.86	8.00e-56	209.00
IUUC-Tgu-116645	Taeniopygia guttata	29.02	4.00e-55	207.00
IUUC-Tru-117590	Takifugu rubripes	29.63	2.00e-56	212.00
IUUC-Tsy-119212	Tarsius syrichta	31.68	5.00e-47	180.00
IUUC-Tni-119915	Tetraodon nigroviridis	30.37	4.00e-57	214.00
IUUC-Tca-121765	Theobroma cacao	28.36	4.00e-57	214.00
IUUC-Tre-121887	Trichoderma reesei	25.15	1.00e-28	119.00
IUUC-Tvi-122262	Trichoderma virens	25.69	5.00e-28	117.00
IUUC-Tur-126483	Triticum urartu	25.07	6.00e-66	243.00
IUUC-Tme-127202	Tuber melanosporum	27.76	1.00e-28	119.00
IUUC-Tbe-127350	Tupaia belangeri	34.09	5.00e-35	140.00
IUUC-Ttr-129077	Tursiops truncatus	27.12	8.00e-47	179.00
IUUC-Uma-129465	Ustilago maydis	30.28	2.00e-44	172.00
IUUC-Vda-129844	Verticillium dahliae	26.62	5.00e-36	144.00
IUUC-Vvi-131397	Vitis vinifera	25.41	6.00e-59	220.00
IUUC-Xtr-132057	Xenopus tropicalis	29.24	1.00e-55	209.00
IUUC-Xma-134139	Xiphophorus maculatus	31.49	8.00e-48	182.00
IUUC-Yli-134424	Yarrowia lipolytica	28.45	2.00e-42	165.00
IUUC-Zma-135839	Zea mays	30.36	1.00e-57	216.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence