iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005658

Ensembl Protein ID

Al_scaffold_0006_780

UniProt Accession

D7M1D2; D7M1D2_ARALL

Genbank Protein ID

EFH47591.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_660715

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0006_780	Al_scaffold_0006_780	Al_scaffold_0006_780

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-25	86.3	195	233
UBD/Beta-Prp	5.60e-43	147.9	154	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH++++ ++ f  s++l+++G+  gtik+WDl + ++++
   Q: 195  GHSSGIDSVTFdaSEGLVAAGAASGTIKLWDLEEAKVVR 233
           8***********888****************98877765 PP

UBD/Beta-Prp

   S: 10   ksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           ++ ++c+k+  +++++l+tg++d+++ +w + +++++ sl+gh++++ +v+f+ ++ + + g+  +tik+wdl+  k v+tl+gh ++ 
   Q: 154  SAAVKCLKIgRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNC 242
           667899999999999*****************************************9******************************** PP
   S: 98   lslsfsp 104
           +s++f+p
   Q: 243  VSVNFHP 249
           *****99 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNTKRAYKLR ILFSDFIFRE FVAHSAAVNC LKIGRKSSKV LVTGGEDHKV NLWAIGKPNA 60
ILSLYGHSSG VDSVTFDASE GLLAAGAASG TTKLWDLEEA KDTNLKIWDI RKKGCIHTYK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACACCA AGCGCGCCTA CAAGCTCCGT ATCCTTTTCT CTGATTTCAT CTTTAGGGTT 60
TATTTCTCGG AATTATTGGG TTTAACTCCA GTGTCGTGCT TGATATGCTC ATTTTAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR008429--CLPTM1
IPR016021--MIF4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05602--CLPTM1
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

aly:ARALYDRAFT_660715

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence