iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014729

Ensembl Protein ID

BRADI3G10650.1

UniProt Accession

I1HZN1; I1HZN1_BRADI

Genbank Protein ID

KQJ94460.1

Protein Name

E3 ubiquitin-protein ligase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100826252; BRADI_3g10650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G10650	BRADI3G10650.1	BRADI3G10650.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.27	3.00e-148	521.00	IUUC-Ath-007192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brachypodium distachyon

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MEMDSIECVS FSDGLDDDDD AVSHLPRPLL KSSSAAGSAA AAAVNVVVVS GGGSGGAGGV 60
VAGPLVTPAM GVHELLECPV CTNSMYPPIH QCQNGHTLCS TCKTRVHNRC PTCRQELGDI 120

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Nucleotide Sequence
(Fasta)

ATGGAGATGG ACAGCATCGA GTGCGTGTCC TTCTCCGACG GCCTGGACGA CGACGACGAC 60
GCGGTGTCCC ACCTCCCCCG CCCCCTCCTC AAGTCGTCCT CCGCCGCCGG CTCCGCGGCG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR001370--BIR_rpt
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bdi:100826252

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003118	Amborella trichopoda	84.41	3.00e-137	480.00
IUUC-Aly-006522	Arabidopsis lyrata	87.64	4.00e-150	523.00
IUUC-Ath-007192	Arabidopsis thaliana	87.27	1.00e-149	521.00
IUUC-Bol-015983	Brassica oleracea	87.50	2.00e-148	517.00
IUUC-Bra-016910	Brassica rapa	86.91	5.00e-149	519.00
IUUC-Gma-042926	Glycine max	82.51	9.00e-135	471.00
IUUC-Mtr-058699	Medicago truncatula	78.53	2.00e-155	540.00
IUUC-Mac-065670	Musa acuminata	78.53	4.00e-157	546.00
IUUC-Oba-075289	Oryza barthii	95.70	4.00e-149	520.00
IUUC-Obr-076037	Oryza brachyantha	80.23	3.00e-131	460.00
IUUC-Ogl-077148	Oryza glaberrima	79.85	9.00e-131	458.00
IUUC-Ogu-078042	Oryza glumaepatula	79.85	4.00e-131	459.00
IUUC-Oin-079325	Oryza indica	79.85	9.00e-131	458.00
IUUC-Olo-080244	Oryza longistaminata	81.96	3.00e-131	461.00
IUUC-Oni-082163	Oryza nivara	79.85	9.00e-131	458.00
IUUC-Oru-084833	Oryza rufipogon	79.85	9.00e-131	458.00
IUUC-Osa-085316	Oryza sativa	79.85	9.00e-131	458.00
IUUC-Ppa-095212	Physcomitrella patens	85.17	5.00e-140	489.00
IUUC-Pop-100033	Populus trichocarpa	89.86	2.00e-154	537.00
IUUC-Ppe-101960	Prunus persica	93.09	2.00e-159	553.00
IUUC-Pva-103132	Pteropus vampyrus	25.16	8.00e-10	56.60
IUUC-Smo-109412	Selaginella moellendorffii	86.54	3.00e-141	493.00
IUUC-Sit-110245	Setaria italica	80.99	2.00e-131	461.00
IUUC-Sly-111259	Solanum lycopersicum	76.92	4.00e-151	526.00
IUUC-Stu-112571	Solanum tuberosum	77.22	7.00e-152	528.00
IUUC-Sbi-114035	Sorghum bicolor	80.99	6.00e-132	462.00
IUUC-Tca-121517	Theobroma cacao	78.24	9.00e-157	545.00
IUUC-Tur-126259	Triticum urartu	80.84	4.00e-131	459.00
IUUC-Vvi-131233	Vitis vinifera	78.07	2.00e-130	457.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence