iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006246

Ensembl Protein ID

Al_scaffold_0007_2641

UniProt Accession

D7MA85; D7MA85_ARALL

Genbank Protein ID

EFH46445.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_658586

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0007_2641	Al_scaffold_0007_2641	Al_scaffold_0007_2641

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-24	85.4	451	483
UBD/Beta-Prp	7.20e-47	160.7	408	668

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H + v++laf  ++  l +v+++ D+ ikvWDl
   Q: 451  HVGCVHDLAFahPNkQLcIVTCGEDKLIKVWDL 483
           9999*******97653359*************7 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgh 93
           +  ++ v +spd++++ +++  + i +++++   l + l    h + v ++ f +  k   +vt++eD++ikvwdls gk ++t++gh
   Q: 408  SVSVSRVSWSPDGNFIGVAFSKHLIHIYSYQGSELRQHLemDAHVGCVHDLAFAHPNKqlCIVTCGEDKLIKVWDLS-GKKLYTFEGH 494
           44455567777777777777777777777777777555543667777777777766666777777777777777776.4557777777 PP
   S: 94   edsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtl 175
           e+ v+s+  ++  + +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg+ l+s+++    D+++  W+ + g + rt 
   Q: 495  EAPVYSICPHQkeNIQFIFSTALDGKIKAWLYDNVGSRVDYDAPG-QWCTTMLYSADGSRLFSCGTskegDSFLVEWNESEGAIKRTY 581
           777777777776455777777777777777666655554344444.366666677777666666653444666666777999999999 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriWdlrsgdllktlq 261
            g  ++s  s++fd ++++++++++d++vk+wd+ +++++ t+++    ++  ++rf +++++l++ ++D+  +i  l +gd l+tl 
   Q: 582  LGFRKKSTGSVQFDTTRNRFMAVGEDNQVKFWDMDNTNILTTVEADGGLPSlpRLRFNKEGNLLAVSTADNGFKI--LANGDGLRTLR 667
           999999********************************9999999886665225778899999999999999988..45555555555 PP
   S: 262  l 262
            
   Q: 668  V 668
           4 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGYFFNLKY FEEKALLGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD LKVFATFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCTC TAAGCAGAGA GTTAGTTTTC TTAATTCTCC AGTTCTTAGA TGAAGAAAAG 60
TTCAAAGAAT CTGTTCACAA GTAAGTTTAA TCATAGCCTT GTTTCGAAAT TTCGTCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

aly:ARALYDRAFT_658586

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Olo-080271	Oryza longistaminata	68.86	0.00e+00	1551.00
IUUC-Sly-111169	Solanum lycopersicum	73.30	0.00e+00	1635.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence