iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006930

UUCD1 version

UUC-ArT-01236

Ensembl Protein ID

AT5G48510.1

UniProt Accession

Q9LV63; Y5851_ARATH

Genbank Protein ID

BAA96971.1; AED95679.1

Protein Name

BTB/POZ domain-containing protein At5g48510

Genbank Nucleotide ID

AB020745; CP002688

Gene Name

At5g48510; MJE7.15

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G48510	AT5G48510.1	AT5G48510.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_3-box	BTB_3-box	15772280

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB	8.80e-11	42.9	25	92
E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box	9.20e-05	21.9	134	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB

   S: 2    Dvilvvg....geeffahkivLaasSsvFyalf.lmele.esksklmveikdvqpevfrallkFlYtg 63
           Dv+l+ +    g+ ++ahk++La++S+vF+++f l e++ ++k+ ++++++++++e ++a+++F+ ++
   Q: 25   DVMLKAKnsdeGSAISAHKLILASRSEVFKNMFeLDEFKtSTKHVETITLSEMKHEELEAFVEFICSD 92
           7888884444699********************99****99999999******************876 PP

E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box

   S: 2    eNclgilrfAdlydcpdLkdaaldfilkhF 31
            N l++l +A+++++  L+d  +++i ++ 
   Q: 134  LNSLDLLVLAQIPFDKVLNDESFSYIKNNI 163
           69**************************95 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Interacts with CUL3A.

Protein Sequence
(Fasta)

MATPTNKEHF SGGLAKVLAE KWQVDVMLKA KNSDEGSAIS AHKLILASRS EVFKNMFELD 60
EFKTSTKHVE TITLSEMKHE ELEAFVEFIC SDGSMLSANV KQHARSLYLA ADKYEILHLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACTC CAACCAACAA AGAGCATTTC TCGGGTGGAC TTGCAAAGGT TTTGGCAGAA 60
AAATGGCAAG TTGACGTAAT GCTCAAGGCA AAGAATAGTG ATGAGGGTTC AGCTATCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB

Pfam

PF00651--BTB

SMART

SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

ath:AT5G48510

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence