iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006799

UUCD1 version

UUC-ArT-00614

Ensembl Protein ID

AT1G63170.1

UniProt Accession

Q8LDB8; Q93Z65; Q9CAM6; RING2_ARATH

Genbank Protein ID

AAG51597.1; AEE34064.1; AAL24200.1; AAM63303.1

Protein Name

E3 ubiquitin-protein ligase At1g63170; RING finger protein At1g63170; RING-type E3 ubiquitin transferase At1g63170

Genbank Nucleotide ID

AC010795; CP002684; AY058092; AY086095

Gene Name

At1g63170; F16M19.7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G63170	AT1G63170.1	AT1G63170.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.30e-08	33.5	325	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++d+  ++ lpCgH+fh  C+ kw       + +++CPlC+
   Q: 325  CCICLSAYEDEteLRELPCGHHFHCGCVDKW------LYINATCPLCK 366
           ********66644888***************......**********7 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Mediates E2-dependent protein ubiquitination.

Protein Sequence
(Fasta)

MSRETTTEAT PLILTDGGGG RRSVRRQGLR EAARLLRHAS SGRMMMREPS MLVREAAAEQ 60
LEERQSDWAY SKPVVVLDFV WNLAFVVVAT AVLVLSSDEN PNMPLRVWII GYGLQCMMHM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTCAAA CATCACGTTT CCCGATTTGT CCGACTCATC ATCTTCTTTC TCTTTCTGTC 60
TCTCTCTCTC TCTGTTCGAA TCGAAACCCT AACAAATCCG AAATTGTCTC TGAGATTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G63170

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005465	Arabidopsis lyrata	94.75	1.00e-162	564.00
IUUC-Ang-009565	Aspergillus niger	35.45	1.00e-09	57.40
IUUC-Bol-015464	Brassica oleracea	75.26	9.00e-140	488.00
IUUC-Bra-017274	Brassica rapa	75.26	8.00e-140	488.00
IUUC-Dme-031973	Drosophila melanogaster	56.00	2.00e-12	67.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence