iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099203

Ensembl Protein ID

POPTR_0014s11040.1

UniProt Accession

A9P8M2; A9P8M2_POPTR

Genbank Protein ID

ABK92725.1; EEE99265.1

Protein Name

Ubiquitin/ribosomal protein 27a

Genbank Nucleotide ID

EF144484; CM000350

Gene Name

POPTRDRAFT_731624; POPTR_0014s11040g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s11040	POPTR_0014s11040.1	POPTR_0014s11040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.70e-41	140.8	1	76
ULD/UDP/UBQ/UBQ_PIM	1.10e-27	96.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKKKKVKL AVLQFYKVDD SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACTTTCAC GCCCTCACCC AAAACAAACC CTAATATTCC CCTCCTCGAG CACCCCTCTC 60
TTATACAAAA CACCGTCAGC CGAAACCTAC TCTTCCCTAT CCGCTCTGCA TCTCCAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

pop:POPTR_0014s11040g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008099	Aspergillus clavatus	84.00	1.00e-53	201.00
IUUC-Afl-008474	Aspergillus flavus	84.00	3.00e-53	200.00
IUUC-Ani-009265	Aspergillus nidulans	84.00	4.00e-53	199.00
IUUC-Ang-009629	Aspergillus niger	84.00	1.00e-53	201.00
IUUC-Aor-009936	Aspergillus oryzae	84.00	3.00e-53	200.00
IUUC-Ate-010436	Aspergillus terreus	84.00	1.00e-53	201.00
IUUC-Bgr-011984	Blumeria graminis	82.47	1.00e-59	221.00
IUUC-Bci-013920	Botrytis cinerea	81.82	2.00e-53	201.00
IUUC-Csv-026028	Ciona savignyi	77.27	2.00e-52	197.00
IUUC-Dor-030658	Dipodomys ordii	96.10	4.00e-39	152.00
IUUC-Kpa-049159	Komagataella pastoris	83.67	6.00e-56	208.00
IUUC-Lma-053163	Leptosphaeria maculans	83.01	1.00e-59	221.00
IUUC-Mvi-060484	Microbotryum violaceum	83.33	4.00e-60	223.00
IUUC-Oba-075488	Oryza barthii	96.69	2.00e-62	230.00
IUUC-Obr-076443	Oryza brachyantha	96.69	2.00e-62	230.00
IUUC-Ogl-077000	Oryza glaberrima	96.69	2.00e-62	230.00
IUUC-Oin-080161	Oryza indica	96.69	2.00e-62	230.00
IUUC-Olo-080936	Oryza longistaminata	92.45	2.00e-25	106.00
IUUC-Ome-081322	Oryza meridionalis	96.69	2.00e-62	230.00
IUUC-Oru-085032	Oryza rufipogon	96.69	2.00e-62	230.00
IUUC-Osa-085398	Oryza sativa	96.69	2.00e-62	230.00
IUUC-Pgr-103596	Puccinia graminis	84.67	4.00e-57	212.00
IUUC-Ptt-103852	Puccinia triticina	66.46	1.00e-46	179.00
IUUC-Spo-108212	Schizosaccharomyces pombe	86.39	3.00e-51	193.00
IUUC-Ssl-108492	Sclerotinia sclerotiorum	81.82	2.00e-53	201.00
IUUC-Sbi-113920	Sorghum bicolor	96.69	5.00e-68	249.00
IUUC-Sre-114920	Sporisorium reilianum	80.13	4.00e-53	199.00
IUUC-Tme-126994	Tuber melanosporum	82.35	2.00e-52	197.00
IUUC-Tbe-127851	Tupaia belangeri	96.10	2.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence