iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099937

Ensembl Protein ID

POPTR_0017s02410.1

UniProt Accession

U5FK53; U5FK53_POPTR

Genbank Protein ID

ERP50316.1

Protein Name

Polyubiquitin family protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_552893; POPTR_0017s02410g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s02410	POPTR_0017s02410.1	POPTR_0017s02410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.30e-164	534.6	229	304
ULD/UDP/UBQ/UBQ_PIM	1.50e-111	365.6	229	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k ++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 229  MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 229  MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 301
           99********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKTKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAATAACC TCTCTCTCTC CTCGAGCTTT GTTTCATTTT TCTTATTTTG CTAAGGTAAT 60
TTCTTCTTGA ACACCTTTCG TTTCCTTTAA TTATTCTCTC TATTCTCTTT AATTAACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

pop:POPTR_0017s02410g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009444	Aspergillus nidulans	98.36	3.00e-171	593.00
IUUC-Ang-009646	Aspergillus niger	98.68	2.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence