iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112647

Ensembl Protein ID

PGSC0003DMT400043378

UniProt Accession

M1BEI3; M1BEI3_SOLTU

Protein Name

Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400016841	PGSC0003DMT400043378	PGSC0003DMT400043378

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-31	107.9	18	54
UBD/Beta-Prp	6.20e-43	148.3	67	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sd..tllvsGsdDgtikvWD 29
           gHtd+v+++a+      ++    ++s+s+D+t+++W+
   Q: 18   GHTDKVWSVAWkpatgiNGipAVFASCSGDKTVRIWE 54
           8***********987775442349************7 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvh 88
           l+++h+  +++ ++sp++++lat+s d+t+ +w++   ++  +++l+gh++ev++v+++++g++l+t+++D+ + +w   + + ++cv+
   Q: 67   LEETHTRTVRSCAWSPSGKFLATASFDATTAIWENVGVDFecVSTLEGHDNEVKSVSWNNSGSLLATCGRDKSVWIWevlPGNEFDCVS 155
           789999999999***********************9988888***********************************666667****** PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl... 166
           +l+gh+++v  ++++ps d+l s s d+ti+vw +e+g              +sgh+++v++++++ +g+ +vs+s+D t+++W +   
   Q: 156  VLQGHTQDVKMVQWNPSMDTLFSCSYDNTIKVW-VENGDSDDWhciqtlgeSNSGHTSTVWSLTFNASGDKMVSCSDDLTIKVWTSkmq 243
           ********************************9.66654332244445888***********************************666 PP
   S: 167  .....ktgkllrtltgghtdsvyslsfd 189
                +  k + tl+g+h++ + s+ ++
   Q: 244  ewdqnAPWKHVCTLSGYHDRTIFSVHWS 271
           6665544566667799999999999887 PP

Organism

Solanum tuberosum

Functional Description
(View)

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Protein Sequence
(Fasta)

MNFEDEDYEL REIQKLEGHT DKVWSVAWKP ATGINGIPAV FASCSGDKTV RIWEENSTGS 60
FQCQAVLEET HTRTVRSCAW SPSGKFLATA SFDATTAIWE NVGVDFECVS TLEGHDNEVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAATTAA AAAAAAATGA GCTGAAGCTC TTCTTCGCGT CAACCAAAAG AGGAAGCCGA 60
AAATAATACA TCCGCCCCTG GTGACTGCAG TCATCTAAAC CCTCCACCAA TCACGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000874	Aegilops tauschii	61.28	1.00e-82	299.00
IUUC-Aml-001317	Ailuropoda melanoleuca	51.88	2.00e-61	228.00
IUUC-Atr-003029	Amborella trichopoda	73.63	2.00e-121	427.00
IUUC-Aly-006458	Arabidopsis lyrata	68.95	1.00e-113	401.00
IUUC-Ath-006671	Arabidopsis thaliana	69.68	1.00e-114	404.00
IUUC-Ago-007820	Ashbya gossypii	38.38	3.00e-43	167.00
IUUC-Acl-008042	Aspergillus clavatus	34.36	3.00e-39	154.00
IUUC-Afl-008639	Aspergillus flavus	33.53	2.00e-39	155.00
IUUC-Afu-008899	Aspergillus fumigatus	32.93	4.00e-38	150.00
IUUC-Ani-009453	Aspergillus nidulans	35.28	1.00e-37	149.00
IUUC-Ang-009758	Aspergillus niger	34.64	2.00e-35	142.00
IUUC-Aor-010212	Aspergillus oryzae	33.53	2.00e-39	155.00
IUUC-Ate-010314	Aspergillus terreus	33.88	9.00e-39	153.00
IUUC-Ame-010676	Astyanax mexicanus	51.32	9.00e-70	255.00
IUUC-Bgr-012095	Blumeria graminis	30.12	8.00e-28	116.00
IUUC-Bta-012884	Bos taurus	51.87	1.00e-61	228.00
IUUC-Bci-013622	Botrytis cinerea	28.82	3.00e-27	114.00
IUUC-Bdi-014614	Brachypodium distachyon	63.94	1.00e-100	358.00
IUUC-Bol-016439	Brassica oleracea	68.00	1.00e-107	381.00
IUUC-Bra-016830	Brassica rapa	67.15	2.00e-108	384.00
IUUC-Cel-018709	Caenorhabditis elegans	37.09	1.00e-42	165.00
IUUC-Cja-019822	Callithrix jacchus	50.37	1.00e-60	225.00
IUUC-Cfa-020823	Canis familiaris	51.88	3.00e-61	227.00
IUUC-Cre-022811	Chlamydomonas reinhardtii	47.90	3.00e-71	260.00
IUUC-Csa-023754	Chlorocebus sabaeus	50.75	6.00e-61	226.00
IUUC-Cin-025395	Ciona intestinalis	44.74	3.00e-56	211.00
IUUC-Csv-025943	Ciona savignyi	42.38	1.00e-55	209.00
IUUC-Cgl-026435	Colletotrichum gloeosporioides	32.63	1.00e-24	106.00
IUUC-Cne-026939	Cryptococcus neoformans	30.43	4.00e-40	157.00
IUUC-Cme-027239	Cyanidioschyzon merolae	40.43	8.00e-40	156.00
IUUC-Dre-028172	Danio rerio	51.14	3.00e-70	257.00
IUUC-Dno-029472	Dasypus novemcinctus	56.11	4.00e-56	210.00
IUUC-Dor-031134	Dipodomys ordii	41.79	2.00e-42	164.00
IUUC-Dse-031535	Dothistroma septosporum	33.75	4.00e-37	147.00
IUUC-Dme-032020	Drosophila melanogaster	51.52	4.00e-72	263.00
IUUC-Eca-033700	Equus caballus	51.13	2.00e-60	224.00
IUUC-Eeu-035010	Erinaceus europaeus	49.62	7.00e-57	213.00
IUUC-Fca-036309	Felis catus	44.94	1.00e-54	205.00
IUUC-Fal-037243	Ficedula albicollis	53.24	3.00e-51	193.00
IUUC-Fox-038058	Fusarium oxysporum	35.66	9.00e-29	120.00
IUUC-Fso-038459	Fusarium solani	33.33	1.00e-29	123.00
IUUC-Gmo-039375	Gadus morhua	51.14	1.00e-64	238.00
IUUC-Ggr-040002	Gaeumannomyces graminis	31.40	3.00e-30	125.00
IUUC-Gga-040294	Gallus gallus	54.84	2.00e-53	201.00
IUUC-Gac-042499	Gasterosteus aculeatus	49.81	2.00e-59	221.00
IUUC-Gma-043543	Glycine max	77.99	2.00e-123	434.00
IUUC-Ggo-045181	Gorilla gorilla	50.75	6.00e-61	226.00
IUUC-Hsa-046528	Homo sapiens	50.75	6.00e-61	226.00
IUUC-Hvu-047341	Hordeum vulgare	68.00	8.00e-78	281.00
IUUC-Itr-048790	Ictidomys tridecemlineatus	51.13	3.00e-61	227.00
IUUC-Kpa-049353	Komagataella pastoris	39.67	6.00e-41	160.00
IUUC-Lch-049763	Latimeria chalumnae	52.42	2.00e-66	244.00
IUUC-Lpe-051500	Leersia perrieri	57.24	1.00e-94	338.00
IUUC-Loc-052021	Lepisosteus oculatus	50.19	3.00e-59	221.00
IUUC-Lma-053331	Leptosphaeria maculans	32.13	2.00e-36	146.00
IUUC-Laf-054558	Loxodonta africana	50.75	4.00e-60	223.00
IUUC-Mcc-055374	Macaca mulatta	50.75	3.00e-61	227.00
IUUC-Meu-056042	Macropus eugenii	55.56	9.00e-54	202.00
IUUC-Mor-057187	Magnaporthe oryzae	31.20	1.00e-30	125.00
IUUC-Mtr-058072	Medicago truncatula	78.97	5.00e-126	442.00
IUUC-Mla-059108	Melampsora laricipopulina	33.63	3.00e-46	177.00
IUUC-Mga-059370	Meleagris gallopavo	43.96	2.00e-32	131.00
IUUC-Mvi-060495	Microbotryum violaceum	35.20	2.00e-49	188.00
IUUC-Mmr-060902	Microcebus murinus	51.50	7.00e-62	229.00
IUUC-Mdo-062510	Monodelphis domestica	51.50	1.00e-61	228.00
IUUC-Mmu-063575	Mus musculus	50.75	1.00e-60	225.00
IUUC-Mac-065322	Musa acuminata	70.65	7.00e-117	412.00
IUUC-Mpu-065925	Mustela putorius furo	51.50	8.00e-62	229.00
IUUC-Mlu-067755	Myotis lucifugus	51.13	3.00e-60	224.00
IUUC-Nfi-068327	Neosartorya fischeri	32.23	3.00e-36	144.00
IUUC-Ncr-068845	Neurospora crassa	34.10	1.00e-24	106.00
IUUC-Nle-069406	Nomascus leucogenys	51.54	6.00e-58	216.00
IUUC-Opr-070416	Ochotona princeps	55.83	3.00e-36	144.00
IUUC-Ont-071936	Oreochromis niloticus	51.89	3.00e-62	230.00
IUUC-Oan-073452	Ornithorhynchus anatinus	52.05	4.00e-37	145.00
IUUC-Ocu-074791	Oryctolagus cuniculus	51.50	4.00e-61	227.00
IUUC-Oba-075636	Oryza barthii	65.30	3.00e-102	363.00
IUUC-Obr-076742	Oryza brachyantha	67.45	1.00e-83	301.00
IUUC-Ogl-077766	Oryza glaberrima	65.30	3.00e-102	363.00
IUUC-Ogu-079039	Oryza glumaepatula	65.30	3.00e-102	363.00
IUUC-Oin-079315	Oryza indica	58.58	1.00e-85	308.00
IUUC-Olo-080669	Oryza longistaminata	55.70	1.00e-93	335.00
IUUC-Ome-081490	Oryza meridionalis	65.80	2.00e-103	367.00
IUUC-Oni-082572	Oryza nivara	65.30	3.00e-102	363.00
IUUC-Opu-083732	Oryza punctata	65.06	6.00e-102	362.00
IUUC-Oru-084763	Oryza rufipogon	65.30	3.00e-102	363.00
IUUC-Osa-085372	Oryza sativa	65.30	3.00e-102	363.00
IUUC-Ola-087379	Oryzias latipes	50.00	7.00e-60	223.00
IUUC-Olu-087801	Ostreococcus lucimarinus	37.40	3.00e-39	154.00
IUUC-Oga-089076	Otolemur garnettii	51.13	2.00e-61	228.00
IUUC-Oar-090022	Ovis aries	51.88	2.00e-61	228.00
IUUC-Ptr-090809	Pan troglodytes	50.75	6.00e-61	226.00
IUUC-Pan-091685	Papio anubis	50.75	7.00e-62	230.00
IUUC-Psi-093046	Pelodiscus sinensis	50.19	7.00e-61	226.00
IUUC-Pma-094181	Petromyzon marinus	50.00	8.00e-70	256.00
IUUC-Pno-094882	Phaeosphaeria nodorum	32.32	2.00e-38	151.00
IUUC-Ppa-095172	Physcomitrella patens	61.25	1.00e-94	338.00
IUUC-Pfo-096396	Poecilia formosa	52.45	8.00e-63	232.00
IUUC-Pab-098427	Pongo abelii	51.14	6.00e-60	223.00
IUUC-Pop-100016	Populus trichocarpa	73.16	2.00e-118	417.00
IUUC-Pca-101048	Procavia capensis	51.12	2.00e-60	225.00
IUUC-Ppe-102050	Prunus persica	78.44	5.00e-126	442.00
IUUC-Pva-103117	Pteropus vampyrus	52.26	3.00e-61	227.00
IUUC-Pgr-103307	Puccinia graminis	35.67	7.00e-51	193.00
IUUC-Ptt-103938	Puccinia triticina	36.84	3.00e-45	174.00
IUUC-Pte-104315	Pyrenophora teres	32.41	4.00e-39	154.00
IUUC-Pyt-104825	Pyrenophora triticirepentis	33.01	5.00e-39	154.00
IUUC-Rno-105523	Rattus norvegicus	51.88	6.00e-61	226.00
IUUC-Sce-106297	Saccharomyces cerevisiae	38.58	2.00e-44	171.00
IUUC-Sha-106981	Sarcophilus harrisii	55.81	2.00e-54	204.00
IUUC-Sja-107715	Schizosaccharomyces japonicus	48.21	4.00e-50	191.00
IUUC-Spo-108214	Schizosaccharomyces pombe	39.13	8.00e-51	193.00
IUUC-Smo-109034	Selaginella moellendorffii	55.99	2.00e-85	307.00
IUUC-Sit-110663	Setaria italica	63.94	1.00e-100	358.00
IUUC-Sly-110898	Solanum lycopersicum	95.22	7.00e-155	538.00
IUUC-Sbi-114288	Sorghum bicolor	65.43	7.00e-102	362.00
IUUC-Sre-115065	Sporisorium reilianum	40.57	5.00e-60	224.00
IUUC-Ssc-115960	Sus scrofa	47.39	2.00e-63	234.00
IUUC-Tru-118382	Takifugu rubripes	53.01	1.00e-72	265.00
IUUC-Tsy-119585	Tarsius syrichta	45.49	3.00e-49	187.00
IUUC-Tni-120133	Tetraodon nigroviridis	49.07	9.00e-64	235.00
IUUC-Tca-121167	Theobroma cacao	74.64	9.00e-123	431.00
IUUC-Tre-122119	Trichoderma reesei	29.29	1.00e-25	109.00
IUUC-Tae-125748	Triticum aestivum	63.94	6.00e-96	342.00
IUUC-Tur-126682	Triticum urartu	67.92	2.00e-81	293.00
IUUC-Tme-127095	Tuber melanosporum	36.07	1.00e-43	169.00
IUUC-Tbe-128004	Tupaia belangeri	51.13	6.00e-61	226.00
IUUC-Ttr-129284	Tursiops truncatus	49.81	7.00e-58	216.00
IUUC-Uma-129527	Ustilago maydis	40.13	9.00e-60	223.00
IUUC-Vda-129854	Verticillium dahliae	32.64	5.00e-25	107.00
IUUC-Vpa-130681	Vicugna pacos	66.07	1.00e-29	122.00
IUUC-Vvi-131004	Vitis vinifera	75.72	5.00e-123	432.00
IUUC-Xtr-131928	Xenopus tropicalis	49.25	7.00e-60	223.00
IUUC-Xma-134290	Xiphophorus maculatus	53.61	8.00e-62	229.00
IUUC-Yli-134364	Yarrowia lipolytica	42.07	3.00e-49	187.00
IUUC-Zma-135658	Zea mays	65.93	3.00e-103	367.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence