iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d035040	Zm00001d035040_T007	Zm00001d035040_T007
Zm00001d035040	Zm00001d035040_T005	Zm00001d035040_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-29	103.3	273	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r +I+ wl++g + cP+trq+l +++l+Pn+t+++li +wce++++
   Q: 273  IPPDFCCPLSLELMSDPVIVASGQTYERVYIKLWLDEGFTICPKTRQRLGHSNLIPNYTVKALIANWCESHDI 345
           8*********************************************************************986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MCLVRTYCIF LMRLQTTYMN VLSFSVILSS RSLALTCMCS STVLMDNLSP STLLNSITCL 60
GALTSDVSTV RPKPVQKYCK NVYDISSIVN PLLEDLCKSP EEQLNEVLRD LDTAVNEASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCCCC ACCCCACTCC TTTCGGAGCC GTTATTACTC GCGCTAGCTG CCGTACTCAT 60
GACATCTGCT GCTCAATTCA ATCGTTGTCG GTTACCTATG CCCCGGCTTC GTCCCGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	78.00	0.00e+00	1245.00
IUUC-Atr-002793	Amborella trichopoda	51.75	0.00e+00	767.00
IUUC-Aly-006261	Arabidopsis lyrata	50.18	0.00e+00	690.00
IUUC-Ath-006925	Arabidopsis thaliana	49.40	0.00e+00	694.00
IUUC-Ang-009574	Aspergillus niger	28.46	4.00e-20	92.40
IUUC-Bdi-014197	Brachypodium distachyon	79.62	0.00e+00	1259.00
IUUC-Bol-015762	Brassica oleracea	70.00	2.00e-136	479.00
IUUC-Bra-016628	Brassica rapa	37.65	4.00e-127	448.00
IUUC-Gma-043920	Glycine max	52.98	0.00e+00	717.00
IUUC-Hvu-047089	Hordeum vulgare	80.17	0.00e+00	1324.00
IUUC-Lpe-051326	Leersia perrieri	83.87	0.00e+00	1338.00
IUUC-Mtr-057910	Medicago truncatula	53.96	0.00e+00	719.00
IUUC-Mac-064791	Musa acuminata	82.51	1.00e-143	503.00
IUUC-Oba-075484	Oryza barthii	83.91	0.00e+00	1282.00
IUUC-Obr-076317	Oryza brachyantha	82.40	0.00e+00	1293.00
IUUC-Ogl-077857	Oryza glaberrima	83.89	0.00e+00	1284.00
IUUC-Ogu-078826	Oryza glumaepatula	83.79	0.00e+00	1286.00
IUUC-Oin-079538	Oryza indica	83.79	0.00e+00	1285.00
IUUC-Olo-080425	Oryza longistaminata	82.61	0.00e+00	1252.00
IUUC-Ome-081524	Oryza meridionalis	84.01	0.00e+00	1289.00
IUUC-Oni-082077	Oryza nivara	83.79	0.00e+00	1282.00
IUUC-Opu-083165	Oryza punctata	83.77	0.00e+00	1301.00
IUUC-Oru-085180	Oryza rufipogon	83.91	0.00e+00	1296.00
IUUC-Osa-085315	Oryza sativa	83.77	0.00e+00	1295.00
IUUC-Ppa-095522	Physcomitrella patens	67.58	2.00e-116	412.00
IUUC-Pop-099220	Populus trichocarpa	77.03	4.00e-153	534.00
IUUC-Ppe-101233	Prunus persica	68.32	6.00e-135	474.00
IUUC-Smo-108813	Selaginella moellendorffii	60.98	2.00e-87	316.00
IUUC-Sit-110349	Setaria italica	89.99	0.00e+00	1461.00
IUUC-Sly-111082	Solanum lycopersicum	52.79	0.00e+00	745.00
IUUC-Stu-112751	Solanum tuberosum	53.10	0.00e+00	751.00
IUUC-Sbi-114085	Sorghum bicolor	93.97	0.00e+00	1420.00
IUUC-Tca-121129	Theobroma cacao	55.31	0.00e+00	803.00
IUUC-Tae-125641	Triticum aestivum	81.29	0.00e+00	1308.00
IUUC-Tur-126525	Triticum urartu	73.82	0.00e+00	1222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence