iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099072

Ensembl Protein ID

POPTR_0007s03740.1

UniProt Accession

B9HEJ2; B9HEJ2_POPTR

Genbank Protein ID

EEE90342.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_763988; POPTR_0007s03740g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s03740	POPTR_0007s03740.1	POPTR_0007s03740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-24	83.5	293	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H++ vtc++f   d ++++sGs Dg+++vW +++ 
   Q: 293  HSSYVTCIQFnpVDeNYFISGSIDGKVRVWGVSEK 327
           9**********9666***************98765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLSSDEGESD LFFDSVDYLE LGCDKLEYDI WLNEPQSVKE RRQGFLRGMG LGGFASNIDE 60
NLGLERITEC SEAVSSSLVS CTNVEEVNLV SYSAGREENS EANCMVDEIL PFSMDKPGAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGAGCT CTGATGAAGG AGAGAGTGAT CTGTTCTTTG ATTCTGTAGA TTACTTGGAA 60
TTGGGGTGTG ATAAGTTAGA GTATGATATT TGGTTGAATG AGCCACAGAG TGTTAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0007s03740g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006003	Arabidopsis lyrata	44.65	7.00e-100	357.00
IUUC-Afu-008761	Aspergillus fumigatus	37.54	7.00e-57	215.00
IUUC-Ani-009270	Aspergillus nidulans	32.93	2.00e-54	207.00
IUUC-Ang-009627	Aspergillus niger	39.06	9.00e-55	208.00
IUUC-Ate-010263	Aspergillus terreus	39.39	5.00e-58	219.00
IUUC-Bol-016429	Brassica oleracea	48.74	5.00e-105	374.00
IUUC-Bra-017701	Brassica rapa	48.97	7.00e-110	390.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	31.86	5.00e-23	100.00
IUUC-Dno-028930	Dasypus novemcinctus	31.75	5.00e-21	95.90
IUUC-Fca-036159	Felis catus	35.73	1.00e-47	184.00
IUUC-Gmo-039226	Gadus morhua	35.17	2.00e-51	196.00
IUUC-Ggr-039923	Gaeumannomyces graminis	35.60	5.00e-54	206.00
IUUC-Kpa-049365	Komagataella pastoris	26.18	5.00e-38	152.00
IUUC-Loc-052691	Lepisosteus oculatus	37.14	2.00e-53	203.00
IUUC-Mor-057274	Magnaporthe oryzae	33.43	3.00e-54	206.00
IUUC-Mpo-057592	Magnaporthe poae	34.44	2.00e-52	201.00
IUUC-Ncr-068874	Neurospora crassa	34.76	1.00e-52	201.00
IUUC-Pno-094806	Phaeosphaeria nodorum	34.96	7.00e-55	207.00
IUUC-Sce-106277	Saccharomyces cerevisiae	29.30	3.00e-39	156.00
IUUC-Sja-107954	Schizosaccharomyces japonicus	32.24	5.00e-55	209.00
IUUC-Spo-108181	Schizosaccharomyces pombe	38.05	9.00e-55	208.00
IUUC-Tme-126882	Tuber melanosporum	39.03	9.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence