iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062415

UUCD1 version

UUC-MoD-00182

Ensembl Protein ID

ENSMODP00000002041.3

UniProt Accession

F6SQS9; F6SQS9_MONDO

Protein Name

Uncharacterized protein

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000001668.3	ENSMODT00000002084.3	ENSMODP00000002041.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.89	8.00e-31	133.00	IUUC-Ath-007462
E3 activity/RING/RING	35.04	1.00e-38	159.00	IUUC-Cel-018659
E3 activity/RING/RING	55.99	2.00e-109	394.00	IUUC-Dme-032034
E3 activity/RING/RING	83.83	0.00e+00	1437.00	IUUC-Hsa-045732
E3 activity/RING/RING	82.86	0.00e+00	1419.00	IUUC-Rno-105165
E3 activity/RING/RING	23.71	2.00e-15	79.70	IUUC-Sce-106384

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MSGAGNKRAA GDGGSGPSEK KQNREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEVLLR RHEGRGELLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAGGAAG AGCCTCCTCT GGTCGCCCAC CTTTCTTGAA GCCATGTCGG GGGCCGGCAA 60
CAAGCGCGCA GCCGGAGATG GAGGCTCGGG CCCCTCGGAG AAAAAGCAGA ATCGGGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination

KEGG

mdo:100013089

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	28.07	1.00e-12	68.60
IUUC-Aml-002295	Ailuropoda melanoleuca	84.81	0.00e+00	1485.00
IUUC-Atr-002836	Amborella trichopoda	30.21	6.00e-26	112.00
IUUC-Aca-004850	Anolis carolinensis	79.29	0.00e+00	679.00
IUUC-Aly-006055	Arabidopsis lyrata	27.51	5.00e-29	123.00
IUUC-Ath-007462	Arabidopsis thaliana	27.78	3.00e-29	124.00
IUUC-Ang-009601	Aspergillus niger	26.00	4.00e-16	80.10
IUUC-Ame-011745	Astyanax mexicanus	82.35	2.00e-153	536.00
IUUC-Bta-013173	Bos taurus	84.62	0.00e+00	1476.00
IUUC-Bci-013926	Botrytis cinerea	37.74	2.00e-08	54.30
IUUC-Bdi-015006	Brachypodium distachyon	29.27	3.00e-31	130.00
IUUC-Bol-015421	Brassica oleracea	27.32	5.00e-28	119.00
IUUC-Bra-016804	Brassica rapa	28.07	8.00e-34	139.00
IUUC-Cel-018659	Caenorhabditis elegans	36.15	1.00e-39	158.00
IUUC-Cja-019042	Callithrix jacchus	83.84	0.00e+00	1437.00
IUUC-Cfa-020318	Canis familiaris	84.62	0.00e+00	1484.00
IUUC-Cpo-021539	Cavia porcellus	84.42	0.00e+00	1451.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	39.08	4.00e-09	56.60
IUUC-Csa-024051	Chlorocebus sabaeus	84.42	0.00e+00	1426.00
IUUC-Cin-025174	Ciona intestinalis	61.68	2.00e-111	396.00
IUUC-Csv-025830	Ciona savignyi	54.79	9.00e-97	348.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	42.31	1.00e-09	58.50
IUUC-Cne-026878	Cryptococcus neoformans	25.93	2.00e-15	78.20
IUUC-Dre-028171	Danio rerio	81.51	3.00e-154	539.00
IUUC-Dno-028892	Dasypus novemcinctus	85.01	0.00e+00	1457.00
IUUC-Dor-030268	Dipodomys ordii	85.71	0.00e+00	691.00
IUUC-Dme-032034	Drosophila melanogaster	43.69	0.00e+00	724.00
IUUC-Ete-032505	Echinops telfairi	77.70	3.00e-154	538.00
IUUC-Eca-033436	Equus caballus	85.01	0.00e+00	1493.00
IUUC-Eeu-035291	Erinaceus europaeus	79.37	0.00e+00	1156.00
IUUC-Fca-035720	Felis catus	84.71	0.00e+00	1481.00
IUUC-Fox-038017	Fusarium oxysporum	25.00	1.00e-10	62.00
IUUC-Fso-038414	Fusarium solani	23.58	2.00e-10	61.20
IUUC-Gmo-039269	Gadus morhua	81.29	7.00e-145	508.00
IUUC-Gac-041303	Gasterosteus aculeatus	65.53	1.00e-154	540.00
IUUC-Gma-042797	Glycine max	27.82	1.00e-36	148.00
IUUC-Ggo-045426	Gorilla gorilla	84.42	0.00e+00	1486.00
IUUC-Hsa-045732	Homo sapiens	84.71	0.00e+00	1509.00
IUUC-Hvu-047689	Hordeum vulgare	29.38	2.00e-28	121.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	84.12	0.00e+00	1454.00
IUUC-Lch-049429	Latimeria chalumnae	85.03	1.00e-163	570.00
IUUC-Lpe-051253	Leersia perrieri	30.47	4.00e-33	136.00
IUUC-Lma-053312	Leptosphaeria maculans	29.28	4.00e-15	76.60
IUUC-Laf-054267	Loxodonta africana	84.52	0.00e+00	1485.00
IUUC-Mcc-055240	Macaca mulatta	84.52	0.00e+00	1432.00
IUUC-Meu-056750	Macropus eugenii	89.45	0.00e+00	1544.00
IUUC-Mor-057068	Magnaporthe oryzae	45.28	3.00e-12	67.00
IUUC-Mtr-057632	Medicago truncatula	28.02	3.00e-32	134.00
IUUC-Mla-059072	Melampsora laricipopulina	27.32	3.00e-26	114.00
IUUC-Mvi-060341	Microbotryum violaceum	29.59	1.00e-22	102.00
IUUC-Mmr-061177	Microcebus murinus	85.11	0.00e+00	1477.00
IUUC-Mmu-063981	Mus musculus	83.33	0.00e+00	1463.00
IUUC-Mac-065103	Musa acuminata	29.75	5.00e-41	163.00
IUUC-Mpu-066498	Mustela putorius furo	83.73	0.00e+00	1444.00
IUUC-Mlu-067242	Myotis lucifugus	84.02	0.00e+00	1473.00
IUUC-Nle-069320	Nomascus leucogenys	81.70	0.00e+00	706.00
IUUC-Opr-070286	Ochotona princeps	79.84	0.00e+00	837.00
IUUC-Ont-071299	Oreochromis niloticus	81.16	3.00e-155	542.00
IUUC-Oan-073538	Ornithorhynchus anatinus	76.77	0.00e+00	632.00
IUUC-Ocu-073799	Oryctolagus cuniculus	84.62	0.00e+00	1482.00
IUUC-Oba-075000	Oryza barthii	27.41	9.00e-29	122.00
IUUC-Obr-076532	Oryza brachyantha	29.06	3.00e-31	130.00
IUUC-Ogl-077200	Oryza glaberrima	29.06	3.00e-31	130.00
IUUC-Ogu-078279	Oryza glumaepatula	27.41	1.00e-28	122.00
IUUC-Oin-079097	Oryza indica	29.06	3.00e-31	130.00
IUUC-Olo-080612	Oryza longistaminata	53.33	2.00e-15	78.60
IUUC-Ome-081304	Oryza meridionalis	28.91	4.00e-30	126.00
IUUC-Oni-082162	Oryza nivara	27.41	1.00e-28	122.00
IUUC-Opu-083683	Oryza punctata	51.52	1.00e-16	82.40
IUUC-Oru-084382	Oryza rufipogon	27.41	1.00e-28	121.00
IUUC-Osa-085839	Oryza sativa	51.52	1.00e-16	82.00
IUUC-Ola-086435	Oryzias latipes	67.75	7.00e-157	548.00
IUUC-Oga-089016	Otolemur garnettii	79.32	0.00e+00	1373.00
IUUC-Oar-089589	Ovis aries	84.52	0.00e+00	1480.00
IUUC-Ptr-090530	Pan troglodytes	81.46	0.00e+00	1106.00
IUUC-Pan-092502	Papio anubis	84.52	0.00e+00	1432.00
IUUC-Psi-093155	Pelodiscus sinensis	72.67	1.00e-141	497.00
IUUC-Pno-095079	Phaeosphaeria nodorum	27.98	3.00e-14	73.90
IUUC-Ppa-095735	Physcomitrella patens	34.71	6.00e-43	169.00
IUUC-Pfo-097527	Poecilia formosa	52.50	0.00e+00	751.00
IUUC-Pab-098619	Pongo abelii	84.52	0.00e+00	1481.00
IUUC-Pop-099583	Populus trichocarpa	30.41	8.00e-34	137.00
IUUC-Pca-100544	Procavia capensis	84.22	0.00e+00	1476.00
IUUC-Ppe-102065	Prunus persica	28.82	2.00e-31	131.00
IUUC-Pva-102479	Pteropus vampyrus	84.82	0.00e+00	1252.00
IUUC-Pgr-103536	Puccinia graminis	25.97	2.00e-22	100.00
IUUC-Ptt-104014	Puccinia triticina	25.40	3.00e-04	40.40
IUUC-Pte-104415	Pyrenophora teres	30.05	2.00e-14	74.30
IUUC-Pyt-104762	Pyrenophora triticirepentis	30.88	3.00e-14	73.90
IUUC-Rno-105165	Rattus norvegicus	82.96	0.00e+00	1446.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.71	4.00e-16	80.10
IUUC-Sha-107602	Sarcophilus harrisii	96.35	0.00e+00	1675.00
IUUC-Ssl-108546	Sclerotinia sclerotiorum	37.74	1.00e-08	55.50
IUUC-Sit-109889	Setaria italica	28.25	1.00e-30	128.00
IUUC-Sly-111490	Solanum lycopersicum	32.79	1.00e-39	158.00
IUUC-Sar-113755	Sorex araneus	82.51	0.00e+00	1162.00
IUUC-Ssc-116134	Sus scrofa	83.93	0.00e+00	1472.00
IUUC-Tru-117867	Takifugu rubripes	81.44	7.00e-156	544.00
IUUC-Tsy-119065	Tarsius syrichta	79.29	0.00e+00	1254.00
IUUC-Tni-120802	Tetraodon nigroviridis	81.44	9.00e-155	541.00
IUUC-Tca-121060	Theobroma cacao	31.68	2.00e-38	154.00
IUUC-Tre-122150	Trichoderma reesei	41.51	2.00e-10	61.20
IUUC-Tvi-122431	Trichoderma virens	41.51	3.00e-10	60.80
IUUC-Tae-123217	Triticum aestivum	27.72	2.00e-29	124.00
IUUC-Tur-126160	Triticum urartu	50.00	4.00e-16	80.50
IUUC-Tme-127177	Tuber melanosporum	22.96	2.00e-13	71.20
IUUC-Tbe-127597	Tupaia belangeri	77.96	0.00e+00	914.00
IUUC-Ttr-128303	Tursiops truncatus	83.45	0.00e+00	1442.00
IUUC-Uma-129488	Ustilago maydis	27.34	9.00e-19	89.00
IUUC-Vda-129815	Verticillium dahliae	40.38	2.00e-09	58.20
IUUC-Vvi-131316	Vitis vinifera	31.56	6.00e-35	142.00
IUUC-Xtr-132906	Xenopus tropicalis	71.40	0.00e+00	665.00
IUUC-Xma-133607	Xiphophorus maculatus	80.61	1.00e-152	533.00
IUUC-Yli-134445	Yarrowia lipolytica	40.62	7.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence