iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPTM	UniProt
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/MUB	MUB	25320573

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.90e-10	41.3	7	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsdtVaeLKeki.....ekklgip.pe.qqrLiykGkiLeddktLady 59
           ++++++ +dg+ +++ k++  +tVa LKeki     ++k++ p +  +++Li+ GkiLe++ktL++ 
   Q: 7    IELKFRLADGTdIGPSKYSQFMTVASLKEKIiaqwpKDKENAPkMInEVKLINGGKILENNKTLSEA 73
           6799********************************99*99999777*****************985 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Ubiquitous.

Protein Sequence
(Fasta)

MGDEDLIELK FRLADGTDIG PSKYSQFMTV ASLKEKIIAQ WPKDKENAPK MINEVKLING 60
GKILENNKTL SEARSLITIG ELPGIVTTMH VVLRPPLFEK KKEKLQNDPP RKSHCVCCIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATATAGTC AACCAAAAAG GTAAATTCAG ATTTGTATAA ATGTAAATGG AGAGATGACT 60
GTATCTTGAG ATTTCTGGTA GTTATTATAT AAGTTGAGAA AGAGAGTAAG AGACCCAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0488--Methylation
KW-0564--Palmitate
KW-0636--Prenylation
KW-1185--Reference proteome

Interpro

IPR017000--MUB
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

ath:AT1G77870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006223	Arabidopsis lyrata	93.33	2.00e-60	223.00
IUUC-Ang-009846	Aspergillus niger	24.59	5.60e-01	28.50
IUUC-Bol-016566	Brassica oleracea	80.00	1.00e-49	187.00
IUUC-Bra-017801	Brassica rapa	79.17	4.00e-51	191.00
IUUC-Cel-018463	Caenorhabditis elegans	31.91	7.00e-03	32.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence