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Tag Content
iUUCD ID IUUC-Ata-000498
Ensembl Protein ID EMT09065
UniProt Accession M8B616; M8B616_AEGTA
Genbank Protein ID EMT09065.1
Protein Name U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Genbank Nucleotide ID KD565088
Gene Name F775_06159
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
F775_06159 EMT09065 EMT09065
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.50e-37 125.2 265 301
UBD/Beta-Prp 3.50e-64 217.6 142 362
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    gH+ sv++++f +d l +s++ D + +vWDlr+g+l
   Q: 265 GHSRSVYGVSFhPDgSLAASCGFDASARVWDLRSGRL 301
    8***********998999*****************97 PP
   


   UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
    + ++t fs+d s+lat+s++g +kvw++ + ++++l+gh++ t+v fsp ++ l+t+s D+t+k+w+ +g+ ++++ gh d++ l+f+psg++l
   Q: 142 DRPLTGCSFSRDASMLATSSWSGIVKVWSMPQIAKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNS-DGSLLMSFDGHLDRLARLAFHPSGKYLG 241
    7799999***************************************************************96.689************************* PP
   S: 111 sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
    ++s d+t r+wd++tg++l +++gh+++v +v++hpdg+l +s++ D r+Wdl++g+l tl g + ++v + f++ng +++ s+d+ ++wdl+t
   Q: 242 TASFDKTWRLWDINTGTELL-LQEGHSRSVYGVSFHPDGSLAASCGFDASARVWDLRSGRLYCTLIG-NVKPVLGVGFSPNGHLVATTSEDNFCRIWDLRT 340
    ********************.*********************************************9.********************************* PP
   S: 212 gecvrtlnghtdnvksvrfspn 233
    +++++ +h++ ++ v+f p+
   Q: 341 RQMLYSIPAHKSLISHVKFEPQ 362
    *****************99865 PP
   

Organism Aegilops tauschii
Protein Sequence
(Fasta)
MAVPTNDSAV RARLRRLGEP ITLFGEGAME RRDRLRALMA RLEAEGQFDR LLRAQEDERG 60
ASGDDDDEGT EQIKYPFFTE GTNQLLQARI DIAMYSLPRA KARVERAKRR LADPDEDPEA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ata-000498|E3,WD_repeat;UBD,Beta-Prp|Aegilops tauschii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCCGTGC CCACCAATGA CTCCGCCGTG CGCGCGCGCC TCCGCCGTCT CGGCGAGCCC 60
ATCACGCTCT TCGGCGAGGG CGCGATGGAG CGCCGCGACC GCCTGCGCGC GCTCATGGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ata-000498|E3,WD_repeat;UBD,Beta-Prp|Aegilops tauschii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

KEGG ats:F775_06159
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Acl-008236 Aspergillus clavatus 35.55 5.00e-71 261.00
IUUC-Afl-008522 Aspergillus flavus 38.03 5.00e-75 274.00
IUUC-Afu-008904 Aspergillus fumigatus 36.84 1.00e-77 283.00
IUUC-Ani-009198 Aspergillus nidulans 37.15 2.00e-77 282.00
IUUC-Ang-009662 Aspergillus niger 40.65 9.00e-82 296.00
IUUC-Aor-009881 Aspergillus oryzae 38.03 4.00e-75 274.00
IUUC-Ate-010333 Aspergillus terreus 37.31 4.00e-73 268.00
IUUC-Bgr-012254 Blumeria graminis 35.82 5.00e-79 288.00
IUUC-Bci-013720 Botrytis cinerea 37.39 4.00e-81 295.00
IUUC-Cel-018632 Caenorhabditis elegans 37.91 3.00e-75 275.00
IUUC-Cne-026793 Cryptococcus neoformans 37.24 3.00e-86 311.00
IUUC-Dme-031783 Drosophila melanogaster 42.36 4.00e-81 295.00
IUUC-Fso-038366 Fusarium solani 37.20 5.00e-76 277.00
IUUC-Hvu-047567 Hordeum vulgare 94.02 0.00e+00 776.00
IUUC-Mtr-058546 Medicago truncatula 60.75 3.00e-143 501.00
IUUC-Nfi-068399 Neosartorya fischeri 36.36 3.00e-79 288.00
IUUC-Ncr-068711 Neurospora crassa 37.74 3.00e-84 305.00
IUUC-Pyt-104571 Pyrenophora triticirepentis 34.79 4.00e-66 244.00
IUUC-Ssl-108550 Sclerotinia sclerotiorum 36.95 1.00e-80 293.00
IUUC-Tae-123761 Triticum aestivum 99.77 0.00e+00 797.00
Created Date 25-Jun-2017

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