iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044269

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000839

Gene Name

EMB2757; LOC100800482; GLYMA_06G026400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G02910	GLYMA06G02910.1	GLYMA06G02910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-20	71.7	15	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH +svt+++f ++ ++l sGs Dg +++WD+ +++
   Q: 15   GHRASVTDISFhPSkPILFSGSADGEVRIWDTLQHR 50
           8***********888****************87766 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSRRPPPDPV AVLRGHRASV TDISFHPSKP ILFSGSADGE VRIWDTLQHR TVSSAWLHSA 60
AHGIVAVAGS SSLGNNKFVS QGRDGTVKVW ELGDAGLSRI PVLTIKTNTY HFCKFSMVKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATATTGTA ATAGTTGGCC ATTTAACCCA CTTCCTCCTC TCTTACTCCT TCCGTTTCCG 60
TCCGCCTCAC CACCGTAGCA GCATCGCCGG CGTCCTCTCC GTCTAACCCG ACAAAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

KEGG

gmx:100800482

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	46.49	9.00e-97	347.00
IUUC-Aml-001556	Ailuropoda melanoleuca	30.21	1.00e-35	143.00
IUUC-Atr-002691	Amborella trichopoda	56.47	2.00e-127	449.00
IUUC-Apl-003227	Anas platyrhynchos	28.97	2.00e-36	146.00
IUUC-Aly-006168	Arabidopsis lyrata	63.12	2.00e-142	498.00
IUUC-Ath-007145	Arabidopsis thaliana	62.60	8.00e-140	489.00
IUUC-Acl-008132	Aspergillus clavatus	27.18	7.00e-12	65.10
IUUC-Afl-008655	Aspergillus flavus	24.94	2.00e-22	100.00
IUUC-Afu-008778	Aspergillus fumigatus	25.74	4.00e-21	95.90
IUUC-Ang-009760	Aspergillus niger	25.94	1.00e-20	94.00
IUUC-Bgr-012119	Blumeria graminis	27.06	3.00e-25	109.00
IUUC-Bta-012556	Bos taurus	30.53	1.00e-35	143.00
IUUC-Bdi-014151	Brachypodium distachyon	54.92	3.00e-115	408.00
IUUC-Bol-016319	Brassica oleracea	61.54	2.00e-139	488.00
IUUC-Bra-016675	Brassica rapa	62.31	4.00e-141	494.00
IUUC-Cja-019523	Callithrix jacchus	29.37	2.00e-34	139.00
IUUC-Cfa-021217	Canis familiaris	29.71	4.00e-31	128.00
IUUC-Cpo-021506	Cavia porcellus	29.24	2.00e-32	132.00
IUUC-Csa-023674	Chlorocebus sabaeus	30.24	8.00e-34	137.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	24.36	3.00e-20	92.80
IUUC-Cne-026836	Cryptococcus neoformans	23.00	2.00e-14	73.90
IUUC-Cme-027295	Cyanidioschyzon merolae	20.98	5.00e-10	58.90
IUUC-Dre-027592	Danio rerio	28.32	3.00e-34	139.00
IUUC-Dno-029880	Dasypus novemcinctus	34.16	4.00e-28	118.00
IUUC-Dor-030266	Dipodomys ordii	37.35	6.00e-26	110.00
IUUC-Dse-031212	Dothistroma septosporum	27.08	7.00e-26	111.00
IUUC-Dme-032209	Drosophila melanogaster	34.55	2.00e-21	96.30
IUUC-Eca-033371	Equus caballus	28.97	9.00e-36	144.00
IUUC-Fca-035558	Felis catus	29.59	6.00e-36	144.00
IUUC-Fal-036794	Ficedula albicollis	30.15	3.00e-39	155.00
IUUC-Gmo-038742	Gadus morhua	27.95	1.00e-33	137.00
IUUC-Gga-040868	Gallus gallus	30.51	3.00e-39	155.00
IUUC-Gac-041646	Gasterosteus aculeatus	28.05	2.00e-37	149.00
IUUC-Ggo-044553	Gorilla gorilla	30.24	4.00e-35	142.00
IUUC-Hsa-046217	Homo sapiens	30.50	3.00e-35	142.00
IUUC-Hvu-047647	Hordeum vulgare	53.44	9.00e-115	406.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	28.91	1.00e-32	133.00
IUUC-Lch-050134	Latimeria chalumnae	27.98	1.00e-34	139.00
IUUC-Lpe-051524	Leersia perrieri	48.85	1.00e-97	349.00
IUUC-Loc-051757	Lepisosteus oculatus	27.72	1.00e-31	130.00
IUUC-Laf-053733	Loxodonta africana	28.83	1.00e-30	127.00
IUUC-Mcc-055477	Macaca mulatta	29.28	8.00e-27	114.00
IUUC-Meu-056758	Macropus eugenii	42.65	2.00e-12	65.90
IUUC-Mor-057289	Magnaporthe oryzae	25.51	1.00e-10	61.20
IUUC-Mpo-057309	Magnaporthe poae	24.46	2.00e-11	63.90
IUUC-Mtr-058616	Medicago truncatula	76.82	2.00e-158	551.00
IUUC-Mga-059637	Meleagris gallopavo	26.76	7.00e-19	87.40
IUUC-Mvi-060385	Microbotryum violaceum	21.72	2.00e-15	76.60
IUUC-Mmr-061675	Microcebus murinus	29.53	4.00e-34	138.00
IUUC-Mdo-062782	Monodelphis domestica	29.46	5.00e-34	138.00
IUUC-Mmu-064058	Mus musculus	30.21	3.00e-39	155.00
IUUC-Mac-065262	Musa acuminata	58.06	7.00e-131	460.00
IUUC-Mpu-066633	Mustela putorius furo	29.71	2.00e-27	117.00
IUUC-Mlu-067333	Myotis lucifugus	36.41	4.00e-30	125.00
IUUC-Nfi-068581	Neosartorya fischeri	24.81	1.00e-20	94.70
IUUC-Ncr-068680	Neurospora crassa	26.45	2.00e-13	70.50
IUUC-Nle-069485	Nomascus leucogenys	29.35	2.00e-32	132.00
IUUC-Oan-073361	Ornithorhynchus anatinus	35.37	2.00e-22	99.40
IUUC-Ocu-073923	Oryctolagus cuniculus	28.83	2.00e-27	116.00
IUUC-Oba-075743	Oryza barthii	48.76	5.00e-103	367.00
IUUC-Obr-076879	Oryza brachyantha	53.99	5.00e-109	387.00
IUUC-Ogl-077813	Oryza glaberrima	52.96	7.00e-112	397.00
IUUC-Ogu-078196	Oryza glumaepatula	48.76	5.00e-103	367.00
IUUC-Oin-080131	Oryza indica	53.23	1.00e-112	399.00
IUUC-Olo-080613	Oryza longistaminata	59.16	3.00e-65	241.00
IUUC-Ome-081912	Oryza meridionalis	49.87	2.00e-104	372.00
IUUC-Oni-082813	Oryza nivara	48.84	1.00e-104	373.00
IUUC-Opu-083663	Oryza punctata	53.39	6.00e-119	420.00
IUUC-Oru-085102	Oryza rufipogon	49.87	3.00e-104	371.00
IUUC-Osa-086204	Oryza sativa	53.23	1.00e-112	399.00
IUUC-Ola-086541	Oryzias latipes	29.82	3.00e-33	135.00
IUUC-Olu-087776	Ostreococcus lucimarinus	32.75	9.00e-17	79.30
IUUC-Oga-088039	Otolemur garnettii	29.37	5.00e-32	131.00
IUUC-Oar-089515	Ovis aries	36.84	1.00e-16	80.50
IUUC-Ptr-091291	Pan troglodytes	30.24	4.00e-35	142.00
IUUC-Pan-092644	Papio anubis	29.97	3.00e-34	139.00
IUUC-Psi-093646	Pelodiscus sinensis	30.08	2.00e-37	149.00
IUUC-Ppa-095698	Physcomitrella patens	41.88	1.00e-81	296.00
IUUC-Pfo-096601	Poecilia formosa	29.41	3.00e-35	142.00
IUUC-Pab-098407	Pongo abelii	29.97	5.00e-35	141.00
IUUC-Pop-099193	Populus trichocarpa	65.63	5.00e-148	517.00
IUUC-Pca-100366	Procavia capensis	28.35	6.00e-33	134.00
IUUC-Ppe-101608	Prunus persica	67.78	1.00e-152	532.00
IUUC-Pva-102775	Pteropus vampyrus	35.58	3.00e-30	125.00
IUUC-Pte-104132	Pyrenophora teres	25.47	3.00e-15	76.60
IUUC-Rno-105626	Rattus norvegicus	29.55	4.00e-36	145.00
IUUC-Sha-106539	Sarcophilus harrisii	29.46	7.00e-33	134.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	32.08	1.00e-16	80.50
IUUC-Spo-108326	Schizosaccharomyces pombe	32.56	2.00e-15	76.60
IUUC-Smo-108756	Selaginella moellendorffii	45.43	3.00e-91	328.00
IUUC-Sit-109771	Setaria italica	56.88	2.00e-130	458.00
IUUC-Sly-111138	Solanum lycopersicum	64.16	2.00e-143	501.00
IUUC-Stu-112425	Solanum tuberosum	63.85	9.00e-146	509.00
IUUC-Sbi-114356	Sorghum bicolor	54.24	2.00e-119	422.00
IUUC-Ssc-115256	Sus scrofa	39.19	5.00e-27	114.00
IUUC-Tgu-116774	Taeniopygia guttata	30.06	1.00e-28	120.00
IUUC-Tru-117900	Takifugu rubripes	38.82	1.00e-28	120.00
IUUC-Tsy-119540	Tarsius syrichta	41.46	7.00e-16	77.80
IUUC-Tni-120252	Tetraodon nigroviridis	28.83	2.00e-38	152.00
IUUC-Tca-121717	Theobroma cacao	69.05	4.00e-152	530.00
IUUC-Tre-122069	Trichoderma reesei	23.10	1.00e-17	84.00
IUUC-Tvi-122673	Trichoderma virens	23.54	4.00e-18	85.90
IUUC-Tae-124693	Triticum aestivum	54.29	5.00e-117	414.00
IUUC-Tme-127222	Tuber melanosporum	33.13	1.00e-14	74.30
IUUC-Ttr-129240	Tursiops truncatus	41.32	1.00e-27	116.00
IUUC-Vda-129913	Verticillium dahliae	25.72	3.00e-16	79.30
IUUC-Vvi-131718	Vitis vinifera	65.80	3.00e-153	534.00
IUUC-Xtr-132109	Xenopus tropicalis	28.86	1.00e-36	146.00
IUUC-Xma-133366	Xiphophorus maculatus	29.92	2.00e-36	146.00
IUUC-Zma-135563	Zea mays	48.88	7.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence